Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 MTND5P1-201ENST00000445440 1375 ntBASIC4.14□□□□□ -1.75
MMP3P08254 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.14□□□□□ -1.75
MMP3P08254 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.13□□□□□ -1.75
MMP3P08254 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.13□□□□□ -1.75
MMP3P08254 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.13□□□□□ -1.75
MMP3P08254 ZNF962P-201ENST00000443465 3140 ntBASIC4.13□□□□□ -1.75
MMP3P08254 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.13□□□□□ -1.75
MMP3P08254 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
MMP3P08254 CR383658.2-201ENST00000547576 1525 ntBASIC4.13□□□□□ -1.75
MMP3P08254 SNORD9-201ENST00000362566 104 ntBASIC4.13□□□□□ -1.75
MMP3P08254 RNU6-1279P-201ENST00000383917 103 ntBASIC4.13□□□□□ -1.75
MMP3P08254 RNU6-146P-201ENST00000384602 108 ntBASIC4.13□□□□□ -1.75
MMP3P08254 SNORD116-4-201ENST00000384733 96 ntBASIC4.13□□□□□ -1.75
MMP3P08254 RNA5SP424-201ENST00000390988 115 ntBASIC4.13□□□□□ -1.75
MMP3P08254 RN7SKP142-201ENST00000411236 328 ntBASIC4.13□□□□□ -1.75
MMP3P08254 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.13□□□□□ -1.75
MMP3P08254 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.13□□□□□ -1.75
MMP3P08254 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.13□□□□□ -1.75
MMP3P08254 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.13□□□□□ -1.75
MMP3P08254 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.13□□□□□ -1.75
MMP3P08254 AC011742.1-201ENST00000431448 434 ntBASIC4.13□□□□□ -1.75
MMP3P08254 AC073063.1-201ENST00000434352 607 ntBASIC4.13□□□□□ -1.75
MMP3P08254 AC096638.2-201ENST00000434965 711 ntBASIC4.13□□□□□ -1.75
MMP3P08254 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.13□□□□□ -1.75
MMP3P08254 AC092641.1-201ENST00000440229 772 ntBASIC4.13□□□□□ -1.75
MMP3P08254 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.13□□□□□ -1.75
MMP3P08254 NDUFS5P3-201ENST00000450668 321 ntBASIC4.13□□□□□ -1.75
MMP3P08254 CYCSP35-201ENST00000451978 304 ntBASIC4.13□□□□□ -1.75
MMP3P08254 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.13□□□□□ -1.75
MMP3P08254 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.13□□□□□ -1.75
MMP3P08254 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.13□□□□□ -1.75
MMP3P08254 VWA8P1-201ENST00000510889 176 ntBASIC4.13□□□□□ -1.75
MMP3P08254 AC026412.2-201ENST00000512270 1075 ntBASIC4.13□□□□□ -1.75
MMP3P08254 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.13□□□□□ -1.75
MMP3P08254 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
MMP3P08254 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.13□□□□□ -1.75
MMP3P08254 RANP9-201ENST00000519957 271 ntBASIC4.13□□□□□ -1.75
MMP3P08254 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.13□□□□□ -1.75
MMP3P08254 AC069240.1-201ENST00000548774 375 ntBASIC4.13□□□□□ -1.75
MMP3P08254 AC008127.2-201ENST00000549925 1075 ntBASIC4.13□□□□□ -1.75
MMP3P08254 AC024909.2-201ENST00000553035 286 ntBASIC4.13□□□□□ -1.75
MMP3P08254 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.13□□□□□ -1.75
MMP3P08254 AC012414.6-201ENST00000568241 401 ntBASIC4.13□□□□□ -1.75
MMP3P08254 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.13□□□□□ -1.75
MMP3P08254 MAGOH2P-202ENST00000584384 429 ntBASIC4.13□□□□□ -1.75
MMP3P08254 AC073544.2-201ENST00000601155 540 ntBASIC4.13□□□□□ -1.75
MMP3P08254 BNIP3P11-201ENST00000603878 563 ntBASIC4.13□□□□□ -1.75
MMP3P08254 AC012557.2-201ENST00000605919 418 ntBASIC4.13□□□□□ -1.75
MMP3P08254 AC113194.1-201ENST00000606037 500 ntBASIC4.13□□□□□ -1.75
MMP3P08254 AC092354.1-201ENST00000606057 376 ntBASIC4.13□□□□□ -1.75
MMP3P08254 AC107214.2-201ENST00000608204 634 ntBASIC4.13□□□□□ -1.75
MMP3P08254 AC239868.4-201ENST00000608318 671 ntBASIC4.13□□□□□ -1.75
MMP3P08254 HULC.1-201ENST00000612720 240 ntBASIC4.13□□□□□ -1.75
MMP3P08254 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.13□□□□□ -1.75
MMP3P08254 AC090582.1-201ENST00000636321 199 ntBASIC4.13□□□□□ -1.75
MMP3P08254 PNPT1P2-201ENST00000456768 2050 ntBASIC4.13□□□□□ -1.75
MMP3P08254 AL133412.1-201ENST00000380194 2992 ntBASIC4.13□□□□□ -1.75
MMP3P08254 PABPC1P9-201ENST00000426076 1612 ntBASIC4.13□□□□□ -1.75
MMP3P08254 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
MMP3P08254 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.13□□□□□ -1.75
MMP3P08254 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
MMP3P08254 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.12□□□□□ -1.75
MMP3P08254 AP002907.1-201ENST00000606361 1430 ntBASIC4.12□□□□□ -1.75
MMP3P08254 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
MMP3P08254 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
MMP3P08254 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.12□□□□□ -1.75
MMP3P08254 IPO8P1-201ENST00000455509 3109 ntBASIC4.12□□□□□ -1.75
MMP3P08254 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
MMP3P08254 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
MMP3P08254 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
MMP3P08254 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MMP3P08254 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
MMP3P08254 AC007685.1-201ENST00000329806 452 ntBASIC4.12□□□□□ -1.75
MMP3P08254 RNA5SP502-201ENST00000362694 119 ntBASIC4.12□□□□□ -1.75
MMP3P08254 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MMP3P08254 MIR490-201ENST00000384865 128 ntBASIC4.12□□□□□ -1.75
MMP3P08254 RNU2-21P-201ENST00000410368 188 ntBASIC4.12□□□□□ -1.75
MMP3P08254 AC073264.1-201ENST00000411508 416 ntBASIC4.12□□□□□ -1.75
MMP3P08254 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.12□□□□□ -1.75
MMP3P08254 AL049610.1-201ENST00000423374 372 ntBASIC4.12□□□□□ -1.75
MMP3P08254 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.12□□□□□ -1.75
MMP3P08254 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.12□□□□□ -1.75
MMP3P08254 AL353706.1-201ENST00000436728 494 ntBASIC4.12□□□□□ -1.75
MMP3P08254 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.12□□□□□ -1.75
MMP3P08254 TRIM60P18-201ENST00000441518 828 ntBASIC4.12□□□□□ -1.75
MMP3P08254 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.12□□□□□ -1.75
MMP3P08254 AC006480.1-201ENST00000449887 378 ntBASIC4.12□□□□□ -1.75
MMP3P08254 AL445669.2-201ENST00000454425 421 ntBASIC4.12□□□□□ -1.75
MMP3P08254 MTCO3P2-201ENST00000457365 171 ntBASIC4.12□□□□□ -1.75
MMP3P08254 MEMO1P3-201ENST00000459811 302 ntBASIC4.12□□□□□ -1.75
MMP3P08254 RPS15AP17-201ENST00000470598 390 ntBASIC4.12□□□□□ -1.75
MMP3P08254 AL136126.1-201ENST00000473603 402 ntBASIC4.12□□□□□ -1.75
MMP3P08254 AC010683.1-201ENST00000473673 378 ntBASIC4.12□□□□□ -1.75
MMP3P08254 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.12□□□□□ -1.75
MMP3P08254 MTND4P2-201ENST00000507767 1203 ntBASIC4.12□□□□□ -1.75
MMP3P08254 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MMP3P08254 AC022447.1-201ENST00000515358 464 ntBASIC4.12□□□□□ -1.75
MMP3P08254 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.12□□□□□ -1.75
MMP3P08254 AC007458.1-201ENST00000542812 373 ntBASIC4.12□□□□□ -1.75
MMP3P08254 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms