Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC114546.3-201ENST00000623582 1734 ntBASIC5.65□□□□□ -1.51
RAPGEF3O95398 AL356473.1-201ENST00000406203 1408 ntBASIC5.65□□□□□ -1.51
RAPGEF3O95398 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.64□□□□□ -1.51
RAPGEF3O95398 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAPGEF3O95398 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.64□□□□□ -1.51
RAPGEF3O95398 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RAPGEF3O95398 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAPGEF3O95398 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RAPGEF3O95398 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RAPGEF3O95398 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAPGEF3O95398 RNA5SP374-201ENST00000362939 125 ntBASIC5.64□□□□□ -1.51
RAPGEF3O95398 RNU6-441P-201ENST00000384545 106 ntBASIC5.64□□□□□ -1.51
RAPGEF3O95398 MIR649-201ENST00000384843 97 ntBASIC5.64□□□□□ -1.51
RAPGEF3O95398 SNRPEP2-201ENST00000397592 279 ntBASIC5.64□□□□□ -1.51
RAPGEF3O95398 DEFB108C-201ENST00000400154 252 ntBASIC5.64□□□□□ -1.51
RAPGEF3O95398 AL031121.1-201ENST00000406553 254 ntBASIC5.64□□□□□ -1.51
RAPGEF3O95398 MTCO1P21-201ENST00000416634 589 ntBASIC5.64□□□□□ -1.51
RAPGEF3O95398 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.64□□□□□ -1.51
RAPGEF3O95398 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.64□□□□□ -1.51
RAPGEF3O95398 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.64□□□□□ -1.51
RAPGEF3O95398 AC087650.1-201ENST00000431445 468 ntBASIC5.64□□□□□ -1.51
RAPGEF3O95398 YWHAZP8-201ENST00000436935 731 ntBASIC5.64□□□□□ -1.51
RAPGEF3O95398 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.64□□□□□ -1.51
RAPGEF3O95398 EPS15P1-201ENST00000448836 336 ntBASIC5.64□□□□□ -1.51
RAPGEF3O95398 AL445433.1-201ENST00000457507 257 ntBASIC5.64□□□□□ -1.51
RAPGEF3O95398 CDC42P4-201ENST00000510507 563 ntBASIC5.64□□□□□ -1.51
RAPGEF3O95398 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.64□□□□□ -1.51
RAPGEF3O95398 PHBP14-201ENST00000512887 367 ntBASIC5.64□□□□□ -1.51
RAPGEF3O95398 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.64□□□□□ -1.51
RAPGEF3O95398 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.64□□□□□ -1.51
RAPGEF3O95398 AC011611.1-201ENST00000552179 197 ntBASIC5.64□□□□□ -1.51
RAPGEF3O95398 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.64□□□□□ -1.51
RAPGEF3O95398 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.64□□□□□ -1.51
RAPGEF3O95398 AC010653.1-201ENST00000571108 881 ntBASIC5.64□□□□□ -1.51
RAPGEF3O95398 MIR4637-201ENST00000582405 84 ntBASIC5.64□□□□□ -1.51
RAPGEF3O95398 MIR4325-201ENST00000583049 90 ntBASIC5.64□□□□□ -1.51
RAPGEF3O95398 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.64□□□□□ -1.51
RAPGEF3O95398 AC083760.1-201ENST00000589621 670 ntBASIC5.64□□□□□ -1.51
RAPGEF3O95398 AC078899.5-201ENST00000612475 178 ntBASIC5.64□□□□□ -1.51
RAPGEF3O95398 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.64□□□□□ -1.51
RAPGEF3O95398 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.64□□□□□ -1.51
RAPGEF3O95398 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RAPGEF3O95398 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAPGEF3O95398 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.64□□□□□ -1.51
RAPGEF3O95398 DDX18P3-201ENST00000404856 2007 ntBASIC5.64□□□□□ -1.51
RAPGEF3O95398 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RAPGEF3O95398 AC117529.2-201ENST00000512159 2068 ntBASIC5.63□□□□□ -1.51
RAPGEF3O95398 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.63□□□□□ -1.51
RAPGEF3O95398 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.63□□□□□ -1.51
RAPGEF3O95398 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RAPGEF3O95398 AL031985.3-201ENST00000565390 2449 ntBASIC5.63□□□□□ -1.51
RAPGEF3O95398 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RAPGEF3O95398 RNU1-15P-201ENST00000353977 144 ntBASIC5.63□□□□□ -1.51
RAPGEF3O95398 RNU6-984P-201ENST00000363236 109 ntBASIC5.63□□□□□ -1.51
RAPGEF3O95398 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RAPGEF3O95398 HMGB1P17-201ENST00000403495 628 ntBASIC5.63□□□□□ -1.51
RAPGEF3O95398 RN7SKP284-201ENST00000411002 343 ntBASIC5.63□□□□□ -1.51
RAPGEF3O95398 RPS23P10-201ENST00000416185 486 ntBASIC5.63□□□□□ -1.51
RAPGEF3O95398 C8orf59P1-201ENST00000429930 303 ntBASIC5.63□□□□□ -1.51
RAPGEF3O95398 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.63□□□□□ -1.51
RAPGEF3O95398 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.63□□□□□ -1.51
RAPGEF3O95398 SNORA71B-202ENST00000439232 272 ntBASIC5.63□□□□□ -1.51
RAPGEF3O95398 HMGB1P37-201ENST00000439613 609 ntBASIC5.63□□□□□ -1.51
RAPGEF3O95398 RPL23AP16-201ENST00000441715 421 ntBASIC5.63□□□□□ -1.51
RAPGEF3O95398 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC5.63□□□□□ -1.51
RAPGEF3O95398 VN1R10P-201ENST00000447106 875 ntBASIC5.63□□□□□ -1.51
RAPGEF3O95398 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.63□□□□□ -1.51
RAPGEF3O95398 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.63□□□□□ -1.51
RAPGEF3O95398 DNAJC19P1-201ENST00000455312 319 ntBASIC5.63□□□□□ -1.51
RAPGEF3O95398 RPL30P11-201ENST00000495304 339 ntBASIC5.63□□□□□ -1.51
RAPGEF3O95398 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.63□□□□□ -1.51
RAPGEF3O95398 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RAPGEF3O95398 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.63□□□□□ -1.51
RAPGEF3O95398 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.63□□□□□ -1.51
RAPGEF3O95398 AC107918.3-201ENST00000533272 382 ntBASIC5.63□□□□□ -1.51
RAPGEF3O95398 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.63□□□□□ -1.51
RAPGEF3O95398 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.63□□□□□ -1.51
RAPGEF3O95398 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.63□□□□□ -1.51
RAPGEF3O95398 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.63□□□□□ -1.51
RAPGEF3O95398 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.63□□□□□ -1.51
RAPGEF3O95398 AC087241.4-201ENST00000612441 480 ntBASIC5.63□□□□□ -1.51
RAPGEF3O95398 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.63□□□□□ -1.51
RAPGEF3O95398 AC018755.4-201ENST00000619715 454 ntBASIC5.63□□□□□ -1.51
RAPGEF3O95398 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.63□□□□□ -1.51
RAPGEF3O95398 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RAPGEF3O95398 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RAPGEF3O95398 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RAPGEF3O95398 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.63□□□□□ -1.51
RAPGEF3O95398 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
RAPGEF3O95398 AL035425.3-201ENST00000564206 4996 ntBASIC5.63□□□□□ -1.51
RAPGEF3O95398 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
RAPGEF3O95398 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.62□□□□□ -1.51
RAPGEF3O95398 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RAPGEF3O95398 AC233263.6-201ENST00000631132 1963 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
RAPGEF3O95398 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.62□□□□□ -1.51
RAPGEF3O95398 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.62□□□□□ -1.51
RAPGEF3O95398 AC058791.1-201ENST00000608412 3198 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
RAPGEF3O95398 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms