Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AL807761.1-201ENST00000417622 171 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 AC083875.1-201ENST00000419509 405 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 AC099336.2-201ENST00000422457 254 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 CHIAP3-201ENST00000423668 1133 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 AC233728.2-201ENST00000425348 757 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 FAR2P4-202ENST00000425399 584 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.72□□□□□ -1.65
CDKL5O76039 AC007742.1-201ENST00000425789 329 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.72□□□□□ -1.65
CDKL5O76039 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.72□□□□□ -1.65
CDKL5O76039 ELOCP26-201ENST00000436067 329 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 AL031663.1-201ENST00000437445 219 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.72□□□□□ -1.65
CDKL5O76039 AC004865.1-201ENST00000442276 1003 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 SNRPEP8-201ENST00000442866 260 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 MTATP6P30-201ENST00000443540 664 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.72□□□□□ -1.65
CDKL5O76039 NUTF2P3-201ENST00000448540 384 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 SNRPFP4-201ENST00000456366 242 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 AC099560.2-201ENST00000457554 255 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 RPL23AP12-201ENST00000467573 473 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.72□□□□□ -1.65
CDKL5O76039 OR4R3P-201ENST00000525084 838 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.72□□□□□ -1.65
CDKL5O76039 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.72□□□□□ -1.65
CDKL5O76039 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.72□□□□□ -1.65
CDKL5O76039 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.72□□□□□ -1.65
CDKL5O76039 AC022968.1-201ENST00000567372 442 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 VN1R79P-201ENST00000593540 513 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 BNIP3P8-201ENST00000597863 560 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 BNIP3P33-201ENST00000598912 569 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 CDRT1-208ENST00000630868 794 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 MIR3688-2-201ENST00000636963 87 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDKL5O76039 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDKL5O76039 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDKL5O76039 AC009951.1-201ENST00000623674 2614 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 DCAF13P1-201ENST00000495256 1330 ntBASIC4.72□□□□□ -1.65
CDKL5O76039 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CDKL5O76039 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CDKL5O76039 LINC02471-203ENST00000641941 4752 ntBASIC4.71□□□□□ -1.65
CDKL5O76039 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL5O76039 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL5O76039 LINC00561-201ENST00000565815 2738 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL5O76039 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
CDKL5O76039 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL5O76039 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL5O76039 RNU6-657P-201ENST00000383904 107 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 SNORA56-201ENST00000383966 129 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 RNU6-225P-201ENST00000384613 103 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 MIR506-201ENST00000384998 124 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL5O76039 MIR1277-201ENST00000408536 78 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 Y_RNA.598-201ENST00000410480 95 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.71□□□□□ -1.66
CDKL5O76039 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.71□□□□□ -1.66
CDKL5O76039 MTND4P28-201ENST00000426217 387 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.71□□□□□ -1.66
CDKL5O76039 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.71□□□□□ -1.66
CDKL5O76039 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.71□□□□□ -1.66
CDKL5O76039 RPL37P21-201ENST00000435890 276 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 RPL7P36-201ENST00000444633 681 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 GDI2P2-201ENST00000445131 608 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 NFU1P2-201ENST00000448700 469 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 USP9YP12-201ENST00000450481 570 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.71□□□□□ -1.66
CDKL5O76039 FABP3P2-201ENST00000453169 399 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 AC013267.1-201ENST00000458227 267 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 RPL21P71-201ENST00000465598 459 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 HMGB1P36-201ENST00000487709 576 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL5O76039 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CDKL5O76039 AC098799.2-201ENST00000509466 868 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 NDUFB4P2-201ENST00000509515 391 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 AC114781.4-201ENST00000513707 639 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 RNA5SP216-201ENST00000516111 123 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.71□□□□□ -1.66
CDKL5O76039 MRPL49P2-201ENST00000521066 465 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.71□□□□□ -1.66
CDKL5O76039 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.71□□□□□ -1.66
CDKL5O76039 GNRHR2P1-201ENST00000555315 631 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 PRELID3BP8-201ENST00000604148 295 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 AL161729.4-201ENST00000604650 476 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.71□□□□□ -1.66
CDKL5O76039 AP001521.1-201ENST00000609150 300 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 AC008250.2-201ENST00000615261 205 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL5O76039 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL5O76039 AL158209.2-201ENST00000619266 216 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 AC233309.1-201ENST00000619522 751 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 AC124864.2-201ENST00000624736 186 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.71□□□□□ -1.66
CDKL5O76039 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.71□□□□□ -1.66
CDKL5O76039 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL5O76039 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL5O76039 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL5O76039 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CDKL5O76039 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms