Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC1.02□□□□□ -2.25
USH2AO75445 MRPL50P4-201ENST00000446432 475 ntBASIC1.02□□□□□ -2.25
USH2AO75445 MLLT10P2-201ENST00000506434 249 ntBASIC1.02□□□□□ -2.25
USH2AO75445 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.02□□□□□ -2.25
USH2AO75445 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.02□□□□□ -2.25
USH2AO75445 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.02□□□□□ -2.25
USH2AO75445 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
USH2AO75445 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC1.02□□□□□ -2.25
USH2AO75445 UQCRFS1P3-201ENST00000407697 385 ntBASIC1.02□□□□□ -2.25
USH2AO75445 RNU4-74P-201ENST00000411280 161 ntBASIC1.02□□□□□ -2.25
USH2AO75445 AC013404.1-201ENST00000413068 249 ntBASIC1.02□□□□□ -2.25
USH2AO75445 AL137159.1-201ENST00000452808 512 ntBASIC1.02□□□□□ -2.25
USH2AO75445 AC008526.1-201ENST00000509149 338 ntBASIC1.02□□□□□ -2.25
USH2AO75445 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.02□□□□□ -2.25
USH2AO75445 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.02□□□□□ -2.25
USH2AO75445 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.02□□□□□ -2.25
USH2AO75445 TTN-204ENST00000360870 18218 ntTSL 5 BASIC1.02□□□□□ -2.25
USH2AO75445 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
USH2AO75445 SNORA51.12-201ENST00000384448 134 ntBASIC1.02□□□□□ -2.25
USH2AO75445 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
USH2AO75445 AC004987.3-201ENST00000413879 771 ntBASIC1.02□□□□□ -2.25
USH2AO75445 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.02□□□□□ -2.25
USH2AO75445 RPL23AP22-201ENST00000437556 453 ntBASIC1.02□□□□□ -2.25
USH2AO75445 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.02□□□□□ -2.25
USH2AO75445 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC1.02□□□□□ -2.25
USH2AO75445 AC021382.1-201ENST00000483523 359 ntBASIC1.02□□□□□ -2.25
USH2AO75445 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.02□□□□□ -2.25
USH2AO75445 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.02□□□□□ -2.25
USH2AO75445 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.02□□□□□ -2.25
USH2AO75445 RNU6-513P-201ENST00000516104 104 ntBASIC1.02□□□□□ -2.25
USH2AO75445 SNORA64.4-201ENST00000516632 81 ntBASIC1.02□□□□□ -2.25
USH2AO75445 RNU4ATAC3P-201ENST00000516699 126 ntBASIC1.02□□□□□ -2.25
USH2AO75445 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC1.02□□□□□ -2.25
USH2AO75445 AC012360.2-201ENST00000609349 391 ntBASIC1.02□□□□□ -2.25
USH2AO75445 AL356266.1-201ENST00000623311 483 ntBASIC1.02□□□□□ -2.25
USH2AO75445 AC079298.2-201ENST00000623885 459 ntBASIC1.02□□□□□ -2.25
USH2AO75445 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
USH2AO75445 API5P2-201ENST00000397055 1498 ntBASIC1.02□□□□□ -2.25
USH2AO75445 AC103988.1-201ENST00000566382 2177 ntBASIC1.02□□□□□ -2.25
USH2AO75445 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.02□□□□□ -2.25
USH2AO75445 FER-202ENST00000438717 1531 ntTSL 2 BASIC1.02□□□□□ -2.25
USH2AO75445 AL512633.1-201ENST00000399931 655 ntBASIC1.02□□□□□ -2.25
USH2AO75445 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.02□□□□□ -2.25
USH2AO75445 SETP4-201ENST00000455717 868 ntBASIC1.02□□□□□ -2.25
USH2AO75445 PPP1R2P5-201ENST00000457256 603 ntBASIC1.02□□□□□ -2.25
USH2AO75445 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.02□□□□□ -2.25
USH2AO75445 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
USH2AO75445 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.02□□□□□ -2.25
USH2AO75445 MYL12AP1-201ENST00000518490 515 ntBASIC1.02□□□□□ -2.25
USH2AO75445 AC084768.2-201ENST00000622736 221 ntBASIC1.02□□□□□ -2.25
USH2AO75445 AC010872.1-201ENST00000624225 675 ntBASIC1.02□□□□□ -2.25
USH2AO75445 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC1.02□□□□□ -2.25
USH2AO75445 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
USH2AO75445 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
USH2AO75445 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
USH2AO75445 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.02□□□□□ -2.25
USH2AO75445 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC1.02□□□□□ -2.25
USH2AO75445 SNORD114-22-201ENST00000365423 72 ntBASIC1.02□□□□□ -2.25
USH2AO75445 MIR583-201ENST00000384846 75 ntBASIC1.02□□□□□ -2.25
USH2AO75445 RPS7P13-201ENST00000413955 498 ntBASIC1.02□□□□□ -2.25
USH2AO75445 OR4K11P-201ENST00000431829 904 ntBASIC1.02□□□□□ -2.25
USH2AO75445 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
USH2AO75445 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.02□□□□□ -2.25
USH2AO75445 IGLVIV-66-1-201ENST00000521832 460 ntBASIC1.02□□□□□ -2.25
USH2AO75445 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC1.02□□□□□ -2.25
USH2AO75445 AC012182.1-201ENST00000570133 895 ntBASIC1.02□□□□□ -2.25
USH2AO75445 HMGB1P50-201ENST00000605814 607 ntBASIC1.02□□□□□ -2.25
USH2AO75445 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC1.02□□□□□ -2.25
USH2AO75445 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.01□□□□□ -2.25
USH2AO75445 MTND4P26-201ENST00000415971 1359 ntBASIC1.01□□□□□ -2.25
USH2AO75445 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
USH2AO75445 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
USH2AO75445 MAPK10-266ENST00000641066 6555 ntBASIC1.01□□□□□ -2.25
USH2AO75445 AC092881.1-201ENST00000638218 2733 ntBASIC1.01□□□□□ -2.25
USH2AO75445 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
USH2AO75445 RN7SKP58-201ENST00000411010 305 ntBASIC1.01□□□□□ -2.25
USH2AO75445 AC004965.1-201ENST00000413033 213 ntBASIC1.01□□□□□ -2.25
USH2AO75445 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.01□□□□□ -2.25
USH2AO75445 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.01□□□□□ -2.25
USH2AO75445 RPL5P30-201ENST00000465511 891 ntBASIC1.01□□□□□ -2.25
USH2AO75445 MIR3683-201ENST00000580847 82 ntBASIC1.01□□□□□ -2.25
USH2AO75445 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
USH2AO75445 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC1.01□□□□□ -2.25
USH2AO75445 Y_RNA.471-201ENST00000384312 102 ntBASIC1.01□□□□□ -2.25
USH2AO75445 RNU6-1105P-201ENST00000384774 107 ntBASIC1.01□□□□□ -2.25
USH2AO75445 AL162578.1-201ENST00000406202 378 ntBASIC1.01□□□□□ -2.25
USH2AO75445 RNA5SP107-201ENST00000411358 122 ntBASIC1.01□□□□□ -2.25
USH2AO75445 SRIP3-201ENST00000413200 219 ntBASIC1.01□□□□□ -2.25
USH2AO75445 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.01□□□□□ -2.25
USH2AO75445 RPS7P5-201ENST00000441482 581 ntBASIC1.01□□□□□ -2.25
USH2AO75445 HSPE1P28-201ENST00000443139 211 ntBASIC1.01□□□□□ -2.25
USH2AO75445 AC233279.1-201ENST00000455300 423 ntBASIC1.01□□□□□ -2.25
USH2AO75445 AC017007.3-201ENST00000479865 435 ntBASIC1.01□□□□□ -2.25
USH2AO75445 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.01□□□□□ -2.25
USH2AO75445 AL390334.1-201ENST00000556395 450 ntBASIC1.01□□□□□ -2.25
USH2AO75445 NIFKP8-201ENST00000560500 874 ntBASIC1.01□□□□□ -2.25
USH2AO75445 AC233280.2-201ENST00000603917 1070 ntBASIC1.01□□□□□ -2.25
USH2AO75445 AC016717.2-201ENST00000609089 5141 ntBASIC1.01□□□□□ -2.25
USH2AO75445 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.01□□□□□ -2.25
USH2AO75445 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms