Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.43□□□□□ -1.7
VPS4BO75351 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS4BO75351 DUXAP4-201ENST00000603046 613 ntBASIC4.43□□□□□ -1.7
VPS4BO75351 AL139286.1-201ENST00000604465 483 ntBASIC4.43□□□□□ -1.7
VPS4BO75351 AP002360.3-201ENST00000607673 710 ntBASIC4.43□□□□□ -1.7
VPS4BO75351 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS4BO75351 AL158209.2-201ENST00000619266 216 ntBASIC4.43□□□□□ -1.7
VPS4BO75351 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS4BO75351 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS4BO75351 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS4BO75351 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VPS4BO75351 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS4BO75351 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
VPS4BO75351 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
VPS4BO75351 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
VPS4BO75351 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS4BO75351 GNG5P1-201ENST00000255500 204 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 Y_RNA.88-201ENST00000363029 99 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 SNORD113.2-201ENST00000364166 89 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 RNA5SP151-201ENST00000365632 117 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS4BO75351 SDHCP2-201ENST00000398565 501 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 FCF1P10-201ENST00000407590 479 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS4BO75351 AC078974.1-201ENST00000411597 223 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS4BO75351 RPL36AP36-201ENST00000418616 301 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 AC140479.3-201ENST00000418944 1126 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS4BO75351 AL035410.1-201ENST00000427409 427 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 RPL22P17-201ENST00000438729 315 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS4BO75351 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS4BO75351 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS4BO75351 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS4BO75351 AC079448.1-201ENST00000449377 373 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 AL162388.1-201ENST00000450912 352 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS4BO75351 HMGB3P21-201ENST00000452483 547 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 IFNWP4-201ENST00000453148 294 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS4BO75351 AC099563.1-201ENST00000456086 418 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS4BO75351 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS4BO75351 AC013267.1-201ENST00000458227 267 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 AC087312.1-201ENST00000471411 480 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 AC023598.1-201ENST00000472521 361 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.42□□□□□ -1.7
VPS4BO75351 NUP58P1-201ENST00000502546 1738 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS4BO75351 AC116353.2-201ENST00000505332 712 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 PPBPP1-201ENST00000510807 373 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 SAP18P1-201ENST00000512058 390 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS4BO75351 AC015795.1-201ENST00000513669 327 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS4BO75351 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS4BO75351 RNU6-718P-201ENST00000516166 105 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS4BO75351 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS4BO75351 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS4BO75351 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.42□□□□□ -1.7
VPS4BO75351 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS4BO75351 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS4BO75351 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS4BO75351 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS4BO75351 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS4BO75351 VN1R85P-201ENST00000601587 426 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 AC007566.2-201ENST00000603642 413 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 AC090970.3-201ENST00000612566 866 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 AC007014.2-201ENST00000615581 479 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 AL138721.1-201ENST00000616756 179 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 AC009159.1-201ENST00000618386 642 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 AL359880.1-201ENST00000621879 266 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 AC074029.4-201ENST00000624796 1859 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS4BO75351 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
VPS4BO75351 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS4BO75351 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS4BO75351 AL133243.3-201ENST00000617415 3004 ntBASIC4.42□□□□□ -1.7
VPS4BO75351 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS4BO75351 AL592437.2-201ENST00000421655 2434 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
VPS4BO75351 RNA5SP28-201ENST00000363841 119 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 RNU6-853P-201ENST00000364306 107 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 RNU6-359P-201ENST00000365466 108 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
VPS4BO75351 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
VPS4BO75351 HSPD1P16-201ENST00000402302 394 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 AL049697.2-201ENST00000403708 294 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 MTND3P17-201ENST00000416968 344 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS4BO75351 OR2B7P-201ENST00000429302 934 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 RPS27AP12-201ENST00000429552 465 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 MTCYBP45-201ENST00000435243 565 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS4BO75351 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS4BO75351 HMGB1P15-201ENST00000453854 435 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 AL359385.1-201ENST00000456509 365 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms