Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 LLPHP1-201ENST00000603571 367 ntBASIC3.8□□□□□ -1.8
LDB3O75112 AL139395.1-201ENST00000603662 160 ntBASIC3.8□□□□□ -1.8
LDB3O75112 AC011451.2-201ENST00000604303 598 ntBASIC3.8□□□□□ -1.8
LDB3O75112 AC104662.1-201ENST00000604448 511 ntBASIC3.8□□□□□ -1.8
LDB3O75112 AC012603.1-201ENST00000606424 528 ntBASIC3.8□□□□□ -1.8
LDB3O75112 AC107214.2-201ENST00000608204 634 ntBASIC3.8□□□□□ -1.8
LDB3O75112 AC012360.2-201ENST00000609349 391 ntBASIC3.8□□□□□ -1.8
LDB3O75112 MIR6868-201ENST00000611215 58 ntBASIC3.8□□□□□ -1.8
LDB3O75112 AC078899.5-201ENST00000612475 178 ntBASIC3.8□□□□□ -1.8
LDB3O75112 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.8□□□□□ -1.8
LDB3O75112 AC022140.2-201ENST00000623500 188 ntBASIC3.8□□□□□ -1.8
LDB3O75112 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDB3O75112 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LDB3O75112 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDB3O75112 AC068254.2-201ENST00000623938 3577 ntBASIC3.8□□□□□ -1.8
LDB3O75112 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDB3O75112 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
LDB3O75112 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDB3O75112 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.79□□□□□ -1.8
LDB3O75112 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.79□□□□□ -1.8
LDB3O75112 AC087190.4-201ENST00000574616 8334 ntBASIC3.79□□□□□ -1.8
LDB3O75112 MTND4P16-201ENST00000466108 1367 ntBASIC3.79□□□□□ -1.8
LDB3O75112 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LDB3O75112 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LDB3O75112 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LDB3O75112 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LDB3O75112 SPRR2C-201ENST00000290702 219 ntBASIC3.79□□□□□ -1.8
LDB3O75112 OR4G2P-201ENST00000328113 903 ntBASIC3.79□□□□□ -1.8
LDB3O75112 MIR448-201ENST00000362131 111 ntBASIC3.79□□□□□ -1.8
LDB3O75112 MIR372-201ENST00000362225 67 ntBASIC3.79□□□□□ -1.8
LDB3O75112 RNU6-462P-201ENST00000362659 105 ntBASIC3.79□□□□□ -1.8
LDB3O75112 Y_RNA.88-201ENST00000363029 99 ntBASIC3.79□□□□□ -1.8
LDB3O75112 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LDB3O75112 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
LDB3O75112 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LDB3O75112 HSPD1P16-201ENST00000402302 394 ntBASIC3.79□□□□□ -1.8
LDB3O75112 RNA5SP104-201ENST00000410989 118 ntBASIC3.79□□□□□ -1.8
LDB3O75112 AC069218.2-201ENST00000411665 344 ntBASIC3.79□□□□□ -1.8
LDB3O75112 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.79□□□□□ -1.8
LDB3O75112 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.79□□□□□ -1.8
LDB3O75112 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.79□□□□□ -1.8
LDB3O75112 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.79□□□□□ -1.8
LDB3O75112 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.79□□□□□ -1.8
LDB3O75112 AL691449.1-201ENST00000426570 421 ntBASIC3.79□□□□□ -1.8
LDB3O75112 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.79□□□□□ -1.8
LDB3O75112 AC004975.1-201ENST00000428733 208 ntBASIC3.79□□□□□ -1.8
LDB3O75112 AL365184.2-201ENST00000431139 435 ntBASIC3.79□□□□□ -1.8
LDB3O75112 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.79□□□□□ -1.8
LDB3O75112 ELOCP18-201ENST00000434209 337 ntBASIC3.79□□□□□ -1.8
LDB3O75112 UBE2FP3-201ENST00000436366 524 ntBASIC3.79□□□□□ -1.8
LDB3O75112 TBCAP1-201ENST00000436520 327 ntBASIC3.79□□□□□ -1.8
LDB3O75112 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.79□□□□□ -1.8
LDB3O75112 AC122718.1-201ENST00000439448 744 ntBASIC3.79□□□□□ -1.8
LDB3O75112 DNAJC19P4-201ENST00000440115 345 ntBASIC3.79□□□□□ -1.8
LDB3O75112 AC069285.2-201ENST00000440210 275 ntBASIC3.79□□□□□ -1.8
LDB3O75112 AL353748.1-201ENST00000440753 474 ntBASIC3.79□□□□□ -1.8
LDB3O75112 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.79□□□□□ -1.8
LDB3O75112 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.79□□□□□ -1.8
LDB3O75112 RPS11P1-201ENST00000451072 473 ntBASIC3.79□□□□□ -1.8
LDB3O75112 NUTF2P7-201ENST00000453086 375 ntBASIC3.79□□□□□ -1.8
LDB3O75112 DNAJC19P1-201ENST00000455312 319 ntBASIC3.79□□□□□ -1.8
LDB3O75112 TRBV26-201ENST00000456572 344 ntBASIC3.79□□□□□ -1.8
LDB3O75112 FAM133DP-201ENST00000464802 691 ntBASIC3.79□□□□□ -1.8
LDB3O75112 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.79□□□□□ -1.8
LDB3O75112 AC126182.1-201ENST00000478134 357 ntBASIC3.79□□□□□ -1.8
LDB3O75112 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.79□□□□□ -1.8
LDB3O75112 AC006499.2-201ENST00000513470 337 ntBASIC3.79□□□□□ -1.8
LDB3O75112 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.79□□□□□ -1.8
LDB3O75112 IGKV2-38-201ENST00000517443 247 ntBASIC3.79□□□□□ -1.8
LDB3O75112 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.79□□□□□ -1.8
LDB3O75112 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.79□□□□□ -1.8
LDB3O75112 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.79□□□□□ -1.8
LDB3O75112 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.79□□□□□ -1.8
LDB3O75112 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.79□□□□□ -1.8
LDB3O75112 MTCO3P24-201ENST00000572729 782 ntBASIC3.79□□□□□ -1.8
LDB3O75112 MIR4637-201ENST00000582405 84 ntBASIC3.79□□□□□ -1.8
LDB3O75112 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.79□□□□□ -1.8
LDB3O75112 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LDB3O75112 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.79□□□□□ -1.8
LDB3O75112 ZYXP1-201ENST00000617638 118 ntBASIC3.79□□□□□ -1.8
LDB3O75112 AC138932.5-201ENST00000617759 563 ntBASIC3.79□□□□□ -1.8
LDB3O75112 U6.42-201ENST00000618440 107 ntBASIC3.79□□□□□ -1.8
LDB3O75112 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.79□□□□□ -1.8
LDB3O75112 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LDB3O75112 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.79□□□□□ -1.8
LDB3O75112 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LDB3O75112 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
LDB3O75112 NMD3P1-201ENST00000439704 1488 ntBASIC3.79□□□□□ -1.8
LDB3O75112 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LDB3O75112 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
LDB3O75112 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LDB3O75112 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LDB3O75112 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.78□□□□□ -1.8
LDB3O75112 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.78□□□□□ -1.8
LDB3O75112 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LDB3O75112 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
LDB3O75112 AC016588.2-201ENST00000632484 3021 ntBASIC3.78□□□□□ -1.8
LDB3O75112 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
LDB3O75112 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LDB3O75112 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 263.6 ms