Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 SNRPGP16-201ENST00000533275 226 ntBASIC2.71□□□□□ -1.98
SGCEO43556 HSPE1P20-201ENST00000538133 289 ntBASIC2.71□□□□□ -1.98
SGCEO43556 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.71□□□□□ -1.98
SGCEO43556 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.71□□□□□ -1.98
SGCEO43556 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
SGCEO43556 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.71□□□□□ -1.98
SGCEO43556 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.71□□□□□ -1.98
SGCEO43556 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.71□□□□□ -1.98
SGCEO43556 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.71□□□□□ -1.98
SGCEO43556 AC079880.2-201ENST00000603790 1213 ntBASIC2.71□□□□□ -1.98
SGCEO43556 AP001330.4-201ENST00000604350 154 ntBASIC2.71□□□□□ -1.98
SGCEO43556 RPL23AP88-201ENST00000605759 454 ntBASIC2.71□□□□□ -1.98
SGCEO43556 AC112503.2-201ENST00000609005 552 ntBASIC2.71□□□□□ -1.98
SGCEO43556 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
SGCEO43556 AC100793.4-201ENST00000613683 429 ntBASIC2.71□□□□□ -1.98
SGCEO43556 MIR7112-201ENST00000616126 65 ntBASIC2.71□□□□□ -1.98
SGCEO43556 AC073569.3-201ENST00000619055 682 ntBASIC2.71□□□□□ -1.98
SGCEO43556 AC244100.1-202ENST00000621554 382 ntBASIC2.71□□□□□ -1.98
SGCEO43556 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.71□□□□□ -1.98
SGCEO43556 AL356490.1-201ENST00000623079 479 ntBASIC2.71□□□□□ -1.98
SGCEO43556 AP000676.4-201ENST00000624659 623 ntBASIC2.71□□□□□ -1.98
SGCEO43556 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SGCEO43556 MTCO1P6-201ENST00000481192 1384 ntBASIC2.71□□□□□ -1.98
SGCEO43556 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.71□□□□□ -1.98
SGCEO43556 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
SGCEO43556 AL161431.1-201ENST00000618966 4205 ntBASIC2.7□□□□□ -1.98
SGCEO43556 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
SGCEO43556 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
SGCEO43556 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.7□□□□□ -1.98
SGCEO43556 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.7□□□□□ -1.98
SGCEO43556 RNU6-799P-201ENST00000363567 107 ntBASIC2.7□□□□□ -1.98
SGCEO43556 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.7□□□□□ -1.98
SGCEO43556 SNORA46-201ENST00000384762 135 ntBASIC2.7□□□□□ -1.98
SGCEO43556 FAT1P1-201ENST00000406588 507 ntBASIC2.7□□□□□ -1.98
SGCEO43556 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.7□□□□□ -1.98
SGCEO43556 RNA5SP274-201ENST00000410484 108 ntBASIC2.7□□□□□ -1.98
SGCEO43556 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.7□□□□□ -1.98
SGCEO43556 AC011242.1-201ENST00000433596 1158 ntBASIC2.7□□□□□ -1.98
SGCEO43556 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.7□□□□□ -1.98
SGCEO43556 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.7□□□□□ -1.98
SGCEO43556 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.7□□□□□ -1.98
SGCEO43556 AC016696.1-201ENST00000446949 318 ntBASIC2.7□□□□□ -1.98
SGCEO43556 MTND5P8-201ENST00000449817 1083 ntBASIC2.7□□□□□ -1.98
SGCEO43556 AC104073.1-201ENST00000451988 151 ntBASIC2.7□□□□□ -1.98
SGCEO43556 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.7□□□□□ -1.98
SGCEO43556 RN7SL807P-201ENST00000470923 297 ntBASIC2.7□□□□□ -1.98
SGCEO43556 RPL7P49-201ENST00000471402 708 ntBASIC2.7□□□□□ -1.98
SGCEO43556 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.7□□□□□ -1.98
SGCEO43556 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.7□□□□□ -1.98
SGCEO43556 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SGCEO43556 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.7□□□□□ -1.98
SGCEO43556 UBL5P2-201ENST00000583788 219 ntBASIC2.7□□□□□ -1.98
SGCEO43556 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.7□□□□□ -1.98
SGCEO43556 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.7□□□□□ -1.98
SGCEO43556 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.7□□□□□ -1.98
SGCEO43556 AC106791.2-201ENST00000604680 391 ntBASIC2.7□□□□□ -1.98
SGCEO43556 MIR1264-201ENST00000616374 69 ntBASIC2.7□□□□□ -1.98
SGCEO43556 MIR622-201ENST00000638396 96 ntBASIC2.7□□□□□ -1.98
SGCEO43556 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SGCEO43556 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.7□□□□□ -1.98
SGCEO43556 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
SGCEO43556 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.7□□□□□ -1.98
SGCEO43556 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.69□□□□□ -1.98
SGCEO43556 OR5BR1P-201ENST00000524992 1330 ntBASIC2.69□□□□□ -1.98
SGCEO43556 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SGCEO43556 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SGCEO43556 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.69□□□□□ -1.98
SGCEO43556 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SGCEO43556 OR5H2-201ENST00000355273 945 ntBASIC2.69□□□□□ -1.98
SGCEO43556 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SGCEO43556 RNU6-730P-201ENST00000383954 104 ntBASIC2.69□□□□□ -1.98
SGCEO43556 RNU6-1074P-201ENST00000383995 104 ntBASIC2.69□□□□□ -1.98
SGCEO43556 RNA5SP171-201ENST00000391071 115 ntBASIC2.69□□□□□ -1.98
SGCEO43556 RNU6-712P-201ENST00000410558 100 ntBASIC2.69□□□□□ -1.98
SGCEO43556 AL389915.1-201ENST00000422463 466 ntBASIC2.69□□□□□ -1.98
SGCEO43556 RPP40P1-201ENST00000426762 456 ntBASIC2.69□□□□□ -1.98
SGCEO43556 OR2AS1P-201ENST00000427827 319 ntBASIC2.69□□□□□ -1.98
SGCEO43556 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.69□□□□□ -1.98
SGCEO43556 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.69□□□□□ -1.98
SGCEO43556 RPL23AP31-201ENST00000456160 467 ntBASIC2.69□□□□□ -1.98
SGCEO43556 AC008571.1-201ENST00000467232 300 ntBASIC2.69□□□□□ -1.98
SGCEO43556 AC015908.1-201ENST00000478739 476 ntBASIC2.69□□□□□ -1.98
SGCEO43556 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SGCEO43556 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SGCEO43556 AC103833.1-201ENST00000517442 172 ntBASIC2.69□□□□□ -1.98
SGCEO43556 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.69□□□□□ -1.98
SGCEO43556 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.69□□□□□ -1.98
SGCEO43556 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.69□□□□□ -1.98
SGCEO43556 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.69□□□□□ -1.98
SGCEO43556 DUXAP4-201ENST00000603046 613 ntBASIC2.69□□□□□ -1.98
SGCEO43556 AC096947.1-201ENST00000603233 470 ntBASIC2.69□□□□□ -1.98
SGCEO43556 MIR92B-201ENST00000607575 96 ntBASIC2.69□□□□□ -1.98
SGCEO43556 AC069200.1-201ENST00000609511 323 ntBASIC2.69□□□□□ -1.98
SGCEO43556 AL138880.2-201ENST00000616214 239 ntBASIC2.69□□□□□ -1.98
SGCEO43556 MTND5P1-201ENST00000445440 1375 ntBASIC2.69□□□□□ -1.98
SGCEO43556 AC006378.2-201ENST00000623178 2476 ntBASIC2.69□□□□□ -1.98
SGCEO43556 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.69□□□□□ -1.98
SGCEO43556 SNORA63.1-201ENST00000362493 131 ntBASIC2.68□□□□□ -1.98
SGCEO43556 SNORA38.1-201ENST00000364172 131 ntBASIC2.68□□□□□ -1.98
SGCEO43556 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms