Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 UBE2V1P6-201ENST00000430840 422 ntBASIC3.48□□□□□ -1.85
CLDN3O15551 AC241584.1-201ENST00000438469 1241 ntBASIC3.48□□□□□ -1.85
CLDN3O15551 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.48□□□□□ -1.85
CLDN3O15551 AC115115.1-201ENST00000449927 248 ntBASIC3.48□□□□□ -1.85
CLDN3O15551 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.48□□□□□ -1.85
CLDN3O15551 PTGES3P5-201ENST00000455109 434 ntBASIC3.48□□□□□ -1.85
CLDN3O15551 DYNLL1P6-201ENST00000503440 264 ntBASIC3.48□□□□□ -1.85
CLDN3O15551 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.48□□□□□ -1.85
CLDN3O15551 SNORA64.4-201ENST00000516632 81 ntBASIC3.48□□□□□ -1.85
CLDN3O15551 RN7SKP57-201ENST00000517248 293 ntBASIC3.48□□□□□ -1.85
CLDN3O15551 SCARNA20.6-201ENST00000517251 106 ntBASIC3.48□□□□□ -1.85
CLDN3O15551 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.48□□□□□ -1.85
CLDN3O15551 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.48□□□□□ -1.85
CLDN3O15551 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.48□□□□□ -1.85
CLDN3O15551 SULT1C2P1-202ENST00000562418 459 ntBASIC3.48□□□□□ -1.85
CLDN3O15551 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.48□□□□□ -1.85
CLDN3O15551 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.48□□□□□ -1.85
CLDN3O15551 VN1R87P-201ENST00000596706 487 ntBASIC3.48□□□□□ -1.85
CLDN3O15551 AL161756.2-201ENST00000604597 246 ntBASIC3.48□□□□□ -1.85
CLDN3O15551 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.48□□□□□ -1.85
CLDN3O15551 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.48□□□□□ -1.85
CLDN3O15551 AC018692.3-201ENST00000623929 123 ntBASIC3.48□□□□□ -1.85
CLDN3O15551 AC091903.1-201ENST00000624322 454 ntBASIC3.48□□□□□ -1.85
CLDN3O15551 AC073476.4-201ENST00000628409 72 ntBASIC3.48□□□□□ -1.85
CLDN3O15551 MIR7153-201ENST00000637758 57 ntBASIC3.48□□□□□ -1.85
CLDN3O15551 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.48□□□□□ -1.85
CLDN3O15551 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLDN3O15551 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLDN3O15551 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.47□□□□□ -1.85
CLDN3O15551 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN3O15551 NUP58P1-201ENST00000502546 1738 ntBASIC3.47□□□□□ -1.85
CLDN3O15551 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN3O15551 RPL7P26-201ENST00000333817 754 ntBASIC3.47□□□□□ -1.85
CLDN3O15551 RNU5B-4P-201ENST00000363508 111 ntBASIC3.47□□□□□ -1.85
CLDN3O15551 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN3O15551 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN3O15551 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.47□□□□□ -1.85
CLDN3O15551 RPS15AP6-201ENST00000420703 385 ntBASIC3.47□□□□□ -1.85
CLDN3O15551 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN3O15551 AC092393.1-201ENST00000439625 742 ntBASIC3.47□□□□□ -1.85
CLDN3O15551 MTCO1P48-201ENST00000448024 1096 ntBASIC3.47□□□□□ -1.85
CLDN3O15551 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.47□□□□□ -1.85
CLDN3O15551 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN3O15551 AC087894.1-201ENST00000538359 518 ntBASIC3.47□□□□□ -1.85
CLDN3O15551 AC008127.2-201ENST00000549925 1075 ntBASIC3.47□□□□□ -1.85
CLDN3O15551 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN3O15551 SNORD84-203ENST00000584275 78 ntBASIC3.47□□□□□ -1.85
CLDN3O15551 AC011492.1-201ENST00000600023 315 ntBASIC3.47□□□□□ -1.85
CLDN3O15551 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.47□□□□□ -1.85
CLDN3O15551 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.47□□□□□ -1.85
CLDN3O15551 AC092954.1-201ENST00000609121 445 ntBASIC3.47□□□□□ -1.85
CLDN3O15551 AC008083.4-201ENST00000615076 444 ntBASIC3.47□□□□□ -1.85
CLDN3O15551 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.47□□□□□ -1.85
CLDN3O15551 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN3O15551 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN3O15551 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN3O15551 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.46□□□□□ -1.86
CLDN3O15551 AL353746.1-201ENST00000566293 6881 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CLDN3O15551 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.46□□□□□ -1.86
CLDN3O15551 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CLDN3O15551 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN3O15551 SNORA51.6-201ENST00000384151 125 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 MIR491-201ENST00000384877 84 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 RPL7P27-201ENST00000403775 720 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.46□□□□□ -1.86
CLDN3O15551 AC245291.1-201ENST00000419501 328 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 AL512649.1-201ENST00000428997 581 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 RABEPKP1-201ENST00000440529 1026 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.46□□□□□ -1.86
CLDN3O15551 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.46□□□□□ -1.86
CLDN3O15551 SSXP4-201ENST00000451349 245 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 RPS27AP1-201ENST00000475545 471 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 AC017015.1-201ENST00000477387 286 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 RPS3AP43-201ENST00000479743 781 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.46□□□□□ -1.86
CLDN3O15551 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN3O15551 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.46□□□□□ -1.86
CLDN3O15551 AC026427.2-201ENST00000506228 536 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 RNU1-143P-201ENST00000516296 146 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 RPL12P22-201ENST00000519073 490 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN3O15551 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
CLDN3O15551 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN3O15551 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN3O15551 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.46□□□□□ -1.86
CLDN3O15551 MIR4666A-201ENST00000580160 79 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN3O15551 AC012493.2-201ENST00000595083 291 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN3O15551 BNIP3P19-201ENST00000605397 577 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 AC011816.2-201ENST00000607089 556 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 U1.23-201ENST00000610293 146 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 RNU1-68P-201ENST00000615382 146 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 MIR8057-201ENST00000620957 69 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 AL590240.3-201ENST00000621416 943 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 U1.39-201ENST00000621562 146 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 AP000943.4-201ENST00000622912 357 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 AC095031.1-201ENST00000623685 672 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 AC026422.1-201ENST00000623961 452 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms