Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPHP1O15259 AC097504.1-201ENST00000515103 2415 ntBASIC4.61□□□□□ -1.67
NPHP1O15259 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
NPHP1O15259 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NPHP1O15259 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.6□□□□□ -1.67
NPHP1O15259 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
NPHP1O15259 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NPHP1O15259 GNG5P1-201ENST00000255500 204 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 Y_RNA.111-201ENST00000363248 100 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 Y_RNA.311-201ENST00000365068 96 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 SOD2P1-201ENST00000396543 562 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 DHFRP6-201ENST00000401776 268 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 HMGB1P17-201ENST00000403495 628 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 OR1AA1P-201ENST00000419597 916 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 CYCSP4-201ENST00000429682 331 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 EZH2P1-201ENST00000431167 291 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 KCTD9P3-201ENST00000434597 1169 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 AC096638.2-201ENST00000434965 711 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.6□□□□□ -1.67
NPHP1O15259 AC005297.2-201ENST00000450430 606 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 RPL26P28-201ENST00000451325 435 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 SUMO2P2-201ENST00000456482 255 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 SNORA59A-201ENST00000459326 152 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 MTND1P16-201ENST00000465177 898 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 AC087312.1-201ENST00000471411 480 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
NPHP1O15259 AC006390.1-201ENST00000508068 283 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.6□□□□□ -1.67
NPHP1O15259 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.6□□□□□ -1.67
NPHP1O15259 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.6□□□□□ -1.67
NPHP1O15259 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.6□□□□□ -1.67
NPHP1O15259 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
NPHP1O15259 AL360157.1-201ENST00000565962 87 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 AC009101.1-201ENST00000568135 242 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 AC106782.4-201ENST00000568264 210 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 MIR5186-201ENST00000577504 120 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.6□□□□□ -1.67
NPHP1O15259 BNIP3P11-201ENST00000603878 563 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 AC080013.4-201ENST00000607624 649 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.6□□□□□ -1.67
NPHP1O15259 AC013470.4-201ENST00000619978 986 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 AC103858.2-201ENST00000621471 543 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.6□□□□□ -1.67
NPHP1O15259 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.6□□□□□ -1.67
NPHP1O15259 AC116618.1-201ENST00000634617 774 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NPHP1O15259 FAM35DP-201ENST00000323387 2712 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.6□□□□□ -1.67
NPHP1O15259 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.6□□□□□ -1.67
NPHP1O15259 AC116096.1-201ENST00000566804 2314 ntBASIC4.6□□□□□ -1.67
NPHP1O15259 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.59□□□□□ -1.67
NPHP1O15259 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NPHP1O15259 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.59□□□□□ -1.67
NPHP1O15259 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NPHP1O15259 MTCO3P12-201ENST00000416718 547 ntBASIC4.59□□□□□ -1.67
NPHP1O15259 AC245054.1-201ENST00000420944 258 ntBASIC4.59□□□□□ -1.67
NPHP1O15259 RPL21P66-201ENST00000426566 466 ntBASIC4.59□□□□□ -1.67
NPHP1O15259 COX7BP2-201ENST00000437976 242 ntBASIC4.59□□□□□ -1.67
NPHP1O15259 MTND5P24-201ENST00000438892 1767 ntBASIC4.59□□□□□ -1.67
NPHP1O15259 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.59□□□□□ -1.67
NPHP1O15259 AC006480.1-201ENST00000449887 378 ntBASIC4.59□□□□□ -1.67
NPHP1O15259 RPL7P24-201ENST00000493052 752 ntBASIC4.59□□□□□ -1.67
NPHP1O15259 AC021146.8-201ENST00000507455 733 ntBASIC4.59□□□□□ -1.67
NPHP1O15259 XKRY-201ENST00000510392 1100 ntBASIC4.59□□□□□ -1.67
NPHP1O15259 MIR2114-201ENST00000516645 80 ntBASIC4.59□□□□□ -1.67
NPHP1O15259 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.59□□□□□ -1.67
NPHP1O15259 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.59□□□□□ -1.67
NPHP1O15259 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.59□□□□□ -1.67
NPHP1O15259 AC008011.1-201ENST00000545989 227 ntBASIC4.59□□□□□ -1.67
NPHP1O15259 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.59□□□□□ -1.67
NPHP1O15259 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.59□□□□□ -1.67
NPHP1O15259 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.59□□□□□ -1.67
NPHP1O15259 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.59□□□□□ -1.67
NPHP1O15259 AL512347.1-201ENST00000566420 503 ntBASIC4.59□□□□□ -1.67
NPHP1O15259 AGGF1P5-201ENST00000567900 919 ntBASIC4.59□□□□□ -1.67
NPHP1O15259 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.59□□□□□ -1.67
NPHP1O15259 AC091057.2-201ENST00000602594 792 ntBASIC4.59□□□□□ -1.67
NPHP1O15259 AC009220.3-201ENST00000604318 586 ntBASIC4.59□□□□□ -1.67
NPHP1O15259 AC105148.1-201ENST00000604961 409 ntBASIC4.59□□□□□ -1.67
NPHP1O15259 AC006386.1-201ENST00000619436 415 ntBASIC4.59□□□□□ -1.67
NPHP1O15259 AL390862.1-201ENST00000635467 1469 ntBASIC4.59□□□□□ -1.67
NPHP1O15259 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NPHP1O15259 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPHP1O15259 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NPHP1O15259 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPHP1O15259 AL079343.1-201ENST00000572358 1771 ntBASIC4.58□□□□□ -1.68
NPHP1O15259 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPHP1O15259 U3.19-201ENST00000390893 196 ntBASIC4.58□□□□□ -1.68
NPHP1O15259 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.58□□□□□ -1.68
NPHP1O15259 RNA5SP120-201ENST00000410900 112 ntBASIC4.58□□□□□ -1.68
NPHP1O15259 AC096664.2-201ENST00000411843 406 ntBASIC4.58□□□□□ -1.68
NPHP1O15259 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.58□□□□□ -1.68
NPHP1O15259 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.58□□□□□ -1.68
NPHP1O15259 MTND4LP10-201ENST00000435146 291 ntBASIC4.58□□□□□ -1.68
NPHP1O15259 MTCO2P20-201ENST00000437339 673 ntBASIC4.58□□□□□ -1.68
NPHP1O15259 MTND4P6-201ENST00000438297 472 ntBASIC4.58□□□□□ -1.68
NPHP1O15259 RN7SL807P-201ENST00000470923 297 ntBASIC4.58□□□□□ -1.68
NPHP1O15259 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.58□□□□□ -1.68
NPHP1O15259 VN1R17P-201ENST00000472048 1090 ntBASIC4.58□□□□□ -1.68
NPHP1O15259 AC025518.1-201ENST00000479856 347 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms