Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.2□□□□□ -2.06
SDCBPO00560 TAB3P1-202ENST00000452645 1634 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.2□□□□□ -2.06
SDCBPO00560 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SDCBPO00560 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
SDCBPO00560 AP002907.1-201ENST00000606361 1430 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 SAGE4P-201ENST00000442271 3381 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
SDCBPO00560 PABPC1P7-201ENST00000413177 1513 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 MIR6073-201ENST00000352083 89 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SDCBPO00560 PRRC2CP1-201ENST00000404428 159 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 AC092638.1-201ENST00000411966 1275 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.19□□□□□ -2.06
SDCBPO00560 USP9YP20-201ENST00000419224 558 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.19□□□□□ -2.06
SDCBPO00560 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.19□□□□□ -2.06
SDCBPO00560 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.19□□□□□ -2.06
SDCBPO00560 XKRYP6-201ENST00000440468 1116 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 XKRYP3-201ENST00000442113 1116 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.19□□□□□ -2.06
SDCBPO00560 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.19□□□□□ -2.06
SDCBPO00560 AC027673.1-201ENST00000456245 405 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 AC133134.1-201ENST00000466800 359 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.19□□□□□ -2.06
SDCBPO00560 AC010301.1-201ENST00000473936 355 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 AC087879.1-201ENST00000474343 374 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.19□□□□□ -2.06
SDCBPO00560 SNORD59.2-201ENST00000516873 68 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 RN7SKP283-201ENST00000517197 270 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.19□□□□□ -2.06
SDCBPO00560 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SDCBPO00560 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SDCBPO00560 BDH2P1-201ENST00000602288 736 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 RPL23AP88-201ENST00000605759 454 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 AC068831.7-201ENST00000616954 363 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 LINC00216-201ENST00000623548 1126 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 AC079228.1-201ENST00000624774 1049 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 AP001002.2-201ENST00000625137 386 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SDCBPO00560 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 AC090897.3-201ENST00000636973 1157 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.19□□□□□ -2.06
SDCBPO00560 CUL1P1-201ENST00000509510 2425 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.19□□□□□ -2.06
SDCBPO00560 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SDCBPO00560 AL359893.1-201ENST00000447628 1580 ntBASIC2.19□□□□□ -2.06
SDCBPO00560 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.18□□□□□ -2.06
SDCBPO00560 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SDCBPO00560 METTL21EP-201ENST00000298105 713 ntBASIC2.18□□□□□ -2.06
SDCBPO00560 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SDCBPO00560 RNU6-1181P-201ENST00000384191 106 ntBASIC2.18□□□□□ -2.06
SDCBPO00560 MIR142-201ENST00000384835 87 ntBASIC2.18□□□□□ -2.06
SDCBPO00560 SNORA48.2-201ENST00000390926 124 ntBASIC2.18□□□□□ -2.06
SDCBPO00560 Z86062.1-201ENST00000406773 777 ntBASIC2.18□□□□□ -2.06
SDCBPO00560 HMGN2P35-201ENST00000412164 270 ntBASIC2.18□□□□□ -2.06
SDCBPO00560 RAP1BP1-201ENST00000412709 553 ntBASIC2.18□□□□□ -2.06
SDCBPO00560 MRPS33P4-201ENST00000434892 317 ntBASIC2.18□□□□□ -2.06
SDCBPO00560 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.18□□□□□ -2.06
SDCBPO00560 AC105272.1-201ENST00000438604 198 ntBASIC2.18□□□□□ -2.06
SDCBPO00560 CYCSP32-201ENST00000440548 321 ntBASIC2.18□□□□□ -2.06
SDCBPO00560 AC010285.1-201ENST00000470580 392 ntBASIC2.18□□□□□ -2.06
SDCBPO00560 AC111193.1-201ENST00000504097 155 ntBASIC2.18□□□□□ -2.06
SDCBPO00560 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.18□□□□□ -2.06
SDCBPO00560 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.18□□□□□ -2.06
SDCBPO00560 IGKV2D-36-201ENST00000518643 226 ntBASIC2.18□□□□□ -2.06
SDCBPO00560 AC025881.1-201ENST00000518851 512 ntBASIC2.18□□□□□ -2.06
SDCBPO00560 CIR1P1-201ENST00000524055 1133 ntBASIC2.18□□□□□ -2.06
SDCBPO00560 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.18□□□□□ -2.06
SDCBPO00560 HSPE1P20-201ENST00000538133 289 ntBASIC2.18□□□□□ -2.06
SDCBPO00560 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.18□□□□□ -2.06
SDCBPO00560 AC107954.1-201ENST00000565906 727 ntBASIC2.18□□□□□ -2.06
SDCBPO00560 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.18□□□□□ -2.06
SDCBPO00560 SNORD84-203ENST00000584275 78 ntBASIC2.18□□□□□ -2.06
SDCBPO00560 AL110115.1-201ENST00000614396 364 ntBASIC2.18□□□□□ -2.06
SDCBPO00560 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.18□□□□□ -2.06
SDCBPO00560 AC010297.1-201ENST00000623948 149 ntBASIC2.18□□□□□ -2.06
SDCBPO00560 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.18□□□□□ -2.06
SDCBPO00560 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SDCBPO00560 ZNF833P-201ENST00000424938 1494 ntBASIC2.18□□□□□ -2.06
SDCBPO00560 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SDCBPO00560 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SDCBPO00560 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SDCBPO00560 AC116096.1-201ENST00000566804 2314 ntBASIC2.18□□□□□ -2.06
SDCBPO00560 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SDCBPO00560 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SDCBPO00560 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SDCBPO00560 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SDCBPO00560 RNU6-50P-201ENST00000362356 103 ntBASIC2.17□□□□□ -2.06
SDCBPO00560 VTRNA1-1-201ENST00000363120 99 ntBASIC2.17□□□□□ -2.06
SDCBPO00560 RNU6-1243P-201ENST00000364028 107 ntBASIC2.17□□□□□ -2.06
SDCBPO00560 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SDCBPO00560 MIR7-1-201ENST00000384871 110 ntBASIC2.17□□□□□ -2.06
SDCBPO00560 MIR9-1-201ENST00000385198 89 ntBASIC2.17□□□□□ -2.06
SDCBPO00560 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SDCBPO00560 AL139095.1-201ENST00000404326 391 ntBASIC2.17□□□□□ -2.06
SDCBPO00560 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.17□□□□□ -2.06
SDCBPO00560 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.17□□□□□ -2.06
SDCBPO00560 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
SDCBPO00560 RPL7P44-201ENST00000424827 742 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms