Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.48□□□□□ -1.69
FOXN3O00409 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.48□□□□□ -1.69
FOXN3O00409 SEPT7P9-203ENST00000604116 343 ntBASIC4.48□□□□□ -1.69
FOXN3O00409 AC055876.5-201ENST00000605667 259 ntBASIC4.48□□□□□ -1.69
FOXN3O00409 AC012603.1-201ENST00000606424 528 ntBASIC4.48□□□□□ -1.69
FOXN3O00409 AC005332.10-201ENST00000612725 619 ntBASIC4.48□□□□□ -1.69
FOXN3O00409 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.48□□□□□ -1.69
FOXN3O00409 RMST_9.1-201ENST00000619945 193 ntBASIC4.48□□□□□ -1.69
FOXN3O00409 AC092656.1-203ENST00000624134 423 ntBASIC4.48□□□□□ -1.69
FOXN3O00409 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FOXN3O00409 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
FOXN3O00409 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.48□□□□□ -1.69
FOXN3O00409 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
FOXN3O00409 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
FOXN3O00409 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
FOXN3O00409 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
FOXN3O00409 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.48□□□□□ -1.69
FOXN3O00409 ZNF962P-201ENST00000443465 3140 ntBASIC4.48□□□□□ -1.69
FOXN3O00409 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.48□□□□□ -1.69
FOXN3O00409 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FOXN3O00409 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.47□□□□□ -1.69
FOXN3O00409 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.47□□□□□ -1.69
FOXN3O00409 CCT4P2-201ENST00000233836 1548 ntBASIC4.47□□□□□ -1.69
FOXN3O00409 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.47□□□□□ -1.69
FOXN3O00409 AC016588.2-201ENST00000632484 3021 ntBASIC4.47□□□□□ -1.69
FOXN3O00409 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.47□□□□□ -1.69
FOXN3O00409 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
FOXN3O00409 RNU4-91P-201ENST00000364778 135 ntBASIC4.47□□□□□ -1.69
FOXN3O00409 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
FOXN3O00409 AL160275.2-201ENST00000412010 394 ntBASIC4.47□□□□□ -1.69
FOXN3O00409 RPS7P13-201ENST00000413955 498 ntBASIC4.47□□□□□ -1.69
FOXN3O00409 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.47□□□□□ -1.69
FOXN3O00409 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.47□□□□□ -1.69
FOXN3O00409 AIMP1P1-201ENST00000418670 937 ntBASIC4.47□□□□□ -1.69
FOXN3O00409 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.47□□□□□ -1.69
FOXN3O00409 RPS3AP44-201ENST00000425466 790 ntBASIC4.47□□□□□ -1.69
FOXN3O00409 AC109583.1-201ENST00000432156 268 ntBASIC4.47□□□□□ -1.69
FOXN3O00409 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXN3O00409 H2AFZP6-201ENST00000444403 394 ntBASIC4.47□□□□□ -1.69
FOXN3O00409 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
FOXN3O00409 RAD23BP3-201ENST00000454157 1152 ntBASIC4.47□□□□□ -1.69
FOXN3O00409 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.47□□□□□ -1.69
FOXN3O00409 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.47□□□□□ -1.69
FOXN3O00409 CFTRP1-201ENST00000456646 183 ntBASIC4.47□□□□□ -1.69
FOXN3O00409 RNA5SP269-201ENST00000459032 137 ntBASIC4.47□□□□□ -1.69
FOXN3O00409 RN7SL303P-201ENST00000469773 251 ntBASIC4.47□□□□□ -1.69
FOXN3O00409 AF213884.1-201ENST00000488102 463 ntBASIC4.47□□□□□ -1.69
FOXN3O00409 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.47□□□□□ -1.69
FOXN3O00409 AC108043.1-201ENST00000512696 574 ntBASIC4.47□□□□□ -1.69
FOXN3O00409 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.47□□□□□ -1.69
FOXN3O00409 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.47□□□□□ -1.69
FOXN3O00409 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXN3O00409 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
FOXN3O00409 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.47□□□□□ -1.69
FOXN3O00409 TVP23BP1-201ENST00000557500 617 ntBASIC4.47□□□□□ -1.69
FOXN3O00409 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXN3O00409 AC087752.4-201ENST00000605911 462 ntBASIC4.47□□□□□ -1.69
FOXN3O00409 MIR6820-201ENST00000611508 62 ntBASIC4.47□□□□□ -1.69
FOXN3O00409 AC114781.5-201ENST00000615297 108 ntBASIC4.47□□□□□ -1.69
FOXN3O00409 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.47□□□□□ -1.69
FOXN3O00409 AC138649.5-201ENST00000637456 137 ntBASIC4.47□□□□□ -1.69
FOXN3O00409 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
FOXN3O00409 AC027287.1-201ENST00000553115 1453 ntBASIC4.47□□□□□ -1.69
FOXN3O00409 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
FOXN3O00409 AC092447.10-201ENST00000620607 1652 ntBASIC4.47□□□□□ -1.69
FOXN3O00409 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
FOXN3O00409 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
FOXN3O00409 AC093536.2-201ENST00000565257 1406 ntBASIC4.46□□□□□ -1.69
FOXN3O00409 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.46□□□□□ -1.69
FOXN3O00409 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
FOXN3O00409 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.69
FOXN3O00409 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
FOXN3O00409 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.46□□□□□ -1.7
FOXN3O00409 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXN3O00409 SNORA56-201ENST00000383966 129 ntBASIC4.46□□□□□ -1.7
FOXN3O00409 MIR93-201ENST00000385024 80 ntBASIC4.46□□□□□ -1.7
FOXN3O00409 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
FOXN3O00409 MTCO3P41-201ENST00000414801 328 ntBASIC4.46□□□□□ -1.7
FOXN3O00409 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXN3O00409 AC009480.2-201ENST00000422916 432 ntBASIC4.46□□□□□ -1.7
FOXN3O00409 OR5BE1P-201ENST00000425977 939 ntBASIC4.46□□□□□ -1.7
FOXN3O00409 AC006548.1-201ENST00000427470 102 ntBASIC4.46□□□□□ -1.7
FOXN3O00409 DNAJC19P7-201ENST00000428811 344 ntBASIC4.46□□□□□ -1.7
FOXN3O00409 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXN3O00409 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.46□□□□□ -1.7
FOXN3O00409 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXN3O00409 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.46□□□□□ -1.7
FOXN3O00409 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.46□□□□□ -1.7
FOXN3O00409 HMGB1P25-201ENST00000468402 607 ntBASIC4.46□□□□□ -1.7
FOXN3O00409 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXN3O00409 AC107401.1-201ENST00000503426 685 ntBASIC4.46□□□□□ -1.7
FOXN3O00409 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.46□□□□□ -1.7
FOXN3O00409 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.46□□□□□ -1.7
FOXN3O00409 MTCO2P32-201ENST00000514865 403 ntBASIC4.46□□□□□ -1.7
FOXN3O00409 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.46□□□□□ -1.7
FOXN3O00409 MIR4277-201ENST00000578298 84 ntBASIC4.46□□□□□ -1.7
FOXN3O00409 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.46□□□□□ -1.7
FOXN3O00409 AC078795.2-201ENST00000602835 1252 ntBASIC4.46□□□□□ -1.7
FOXN3O00409 AL031176.1-201ENST00000604554 466 ntBASIC4.46□□□□□ -1.7
FOXN3O00409 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms