Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC188H7C350 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CCDC188H7C350 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC188H7C350 SNORA73.2-201ENST00000364946 201 ntBASIC3.67□□□□□ -1.82
CCDC188H7C350 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC188H7C350 DHFRP6-201ENST00000401776 268 ntBASIC3.67□□□□□ -1.82
CCDC188H7C350 HSPE1P26-201ENST00000405341 275 ntBASIC3.67□□□□□ -1.82
CCDC188H7C350 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC188H7C350 RN7SKP53-201ENST00000411337 315 ntBASIC3.67□□□□□ -1.82
CCDC188H7C350 RNA5SP107-201ENST00000411358 122 ntBASIC3.67□□□□□ -1.82
CCDC188H7C350 USP9YP33-201ENST00000412220 421 ntBASIC3.67□□□□□ -1.82
CCDC188H7C350 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC188H7C350 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC188H7C350 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC188H7C350 USP9YP35-201ENST00000435696 412 ntBASIC3.67□□□□□ -1.82
CCDC188H7C350 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC188H7C350 COX7BP2-201ENST00000437976 242 ntBASIC3.67□□□□□ -1.82
CCDC188H7C350 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC188H7C350 RPL7P52-201ENST00000449200 742 ntBASIC3.67□□□□□ -1.82
CCDC188H7C350 NUTF2P7-201ENST00000453086 375 ntBASIC3.67□□□□□ -1.82
CCDC188H7C350 AC097493.1-201ENST00000463958 372 ntBASIC3.67□□□□□ -1.82
CCDC188H7C350 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.67□□□□□ -1.82
CCDC188H7C350 COX7A2P2-201ENST00000505291 250 ntBASIC3.67□□□□□ -1.82
CCDC188H7C350 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC188H7C350 AC093281.2-201ENST00000510153 597 ntBASIC3.67□□□□□ -1.82
CCDC188H7C350 MTCO2P32-201ENST00000514865 403 ntBASIC3.67□□□□□ -1.82
CCDC188H7C350 OR5AK1P-201ENST00000524837 922 ntBASIC3.67□□□□□ -1.82
CCDC188H7C350 NBEAP1-201ENST00000554452 979 ntBASIC3.67□□□□□ -1.82
CCDC188H7C350 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC188H7C350 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC188H7C350 AC087499.8-201ENST00000578406 226 ntBASIC3.67□□□□□ -1.82
CCDC188H7C350 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.67□□□□□ -1.82
CCDC188H7C350 AC012669.1-201ENST00000603209 283 ntBASIC3.67□□□□□ -1.82
CCDC188H7C350 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC188H7C350 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC188H7C350 AP002782.1-201ENST00000623107 614 ntBASIC3.67□□□□□ -1.82
CCDC188H7C350 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC188H7C350 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC188H7C350 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC188H7C350 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC188H7C350 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC188H7C350 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC188H7C350 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CCDC188H7C350 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CCDC188H7C350 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.66□□□□□ -1.82
CCDC188H7C350 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC188H7C350 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC188H7C350 RNU6-28P-201ENST00000362378 107 ntBASIC3.66□□□□□ -1.82
CCDC188H7C350 RPL23AP29-201ENST00000397284 453 ntBASIC3.66□□□□□ -1.82
CCDC188H7C350 RNA5SP293-201ENST00000410527 113 ntBASIC3.66□□□□□ -1.82
CCDC188H7C350 ELOCP9-201ENST00000418624 239 ntBASIC3.66□□□□□ -1.82
CCDC188H7C350 AC245291.1-201ENST00000419501 328 ntBASIC3.66□□□□□ -1.82
CCDC188H7C350 AC006960.1-201ENST00000419980 153 ntBASIC3.66□□□□□ -1.82
CCDC188H7C350 AL139247.1-201ENST00000422768 325 ntBASIC3.66□□□□□ -1.82
CCDC188H7C350 AL590233.1-201ENST00000430017 456 ntBASIC3.66□□□□□ -1.82
CCDC188H7C350 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC188H7C350 HMGB1P12-201ENST00000438594 598 ntBASIC3.66□□□□□ -1.82
CCDC188H7C350 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.66□□□□□ -1.82
CCDC188H7C350 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC188H7C350 HMGN1P18-201ENST00000457642 277 ntBASIC3.66□□□□□ -1.82
CCDC188H7C350 AL133162.1-201ENST00000463228 453 ntBASIC3.66□□□□□ -1.82
CCDC188H7C350 HMGB1P25-201ENST00000468402 607 ntBASIC3.66□□□□□ -1.82
CCDC188H7C350 RPL7P18-201ENST00000478965 734 ntBASIC3.66□□□□□ -1.82
CCDC188H7C350 AL024509.2-201ENST00000493462 493 ntBASIC3.66□□□□□ -1.82
CCDC188H7C350 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC188H7C350 TXNP6-201ENST00000510190 310 ntBASIC3.66□□□□□ -1.82
CCDC188H7C350 AC107934.2-201ENST00000518653 310 ntBASIC3.66□□□□□ -1.82
CCDC188H7C350 RANP9-201ENST00000519957 271 ntBASIC3.66□□□□□ -1.82
CCDC188H7C350 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC188H7C350 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC188H7C350 AC084824.1-201ENST00000550917 1005 ntBASIC3.66□□□□□ -1.82
CCDC188H7C350 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC188H7C350 AC087481.2-201ENST00000565492 330 ntBASIC3.66□□□□□ -1.82
CCDC188H7C350 MIR3160-1-201ENST00000577972 85 ntBASIC3.66□□□□□ -1.82
CCDC188H7C350 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC188H7C350 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC188H7C350 AC097714.1-201ENST00000511272 1647 ntBASIC3.66□□□□□ -1.82
CCDC188H7C350 MTND5P24-201ENST00000438892 1767 ntBASIC3.66□□□□□ -1.82
CCDC188H7C350 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC188H7C350 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC188H7C350 AF117829.1-206ENST00000621883 3802 ntBASIC3.65□□□□□ -1.82
CCDC188H7C350 OR4G11P-202ENST00000642116 1414 ntBASIC3.65□□□□□ -1.83
CCDC188H7C350 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC188H7C350 RPL23AP57-201ENST00000332361 466 ntBASIC3.65□□□□□ -1.83
CCDC188H7C350 SNORA70C-201ENST00000384538 135 ntBASIC3.65□□□□□ -1.83
CCDC188H7C350 MIR513B-201ENST00000385136 84 ntBASIC3.65□□□□□ -1.83
CCDC188H7C350 RPL7P60-201ENST00000397636 735 ntBASIC3.65□□□□□ -1.83
CCDC188H7C350 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC188H7C350 RNA5SP317-201ENST00000410176 116 ntBASIC3.65□□□□□ -1.83
CCDC188H7C350 RN7SKP263-201ENST00000411194 309 ntBASIC3.65□□□□□ -1.83
CCDC188H7C350 RNA5SP311-201ENST00000411290 116 ntBASIC3.65□□□□□ -1.83
CCDC188H7C350 HMGB1P49-201ENST00000418882 569 ntBASIC3.65□□□□□ -1.83
CCDC188H7C350 BX890604.2-201ENST00000427883 474 ntBASIC3.65□□□□□ -1.83
CCDC188H7C350 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC188H7C350 Z80107.1-201ENST00000436830 412 ntBASIC3.65□□□□□ -1.83
CCDC188H7C350 SDCBPP1-201ENST00000440192 890 ntBASIC3.65□□□□□ -1.83
CCDC188H7C350 AL121871.1-201ENST00000443413 436 ntBASIC3.65□□□□□ -1.83
CCDC188H7C350 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC188H7C350 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC188H7C350 RNU7-170P-201ENST00000459303 61 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms