Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 RN7SL504P-201ENST00000494496 287 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 SNORA70.19-201ENST00000516717 90 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 AC092470.1-201ENST00000546187 132 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 MTND1P24-201ENST00000552175 861 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 AC138915.2-201ENST00000569776 97 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 AC005000.2-201ENST00000605468 310 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 AC092954.1-201ENST00000609121 445 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 AC068787.1-201ENST00000623908 691 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 U6.98-201ENST00000637157 84 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 AC093010.3-201ENST00000570269 15214 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 AC130650.2-201ENST00000618736 2403 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 RNU6-657P-201ENST00000383904 107 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 RNU6-636P-201ENST00000384598 107 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 SSXP10-201ENST00000402595 565 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 RNA5SP80-201ENST00000410475 111 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 RNU2-42P-201ENST00000410697 113 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 AC091390.3-201ENST00000426478 338 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 AL512649.1-201ENST00000428997 581 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 RPL23AP16-201ENST00000441715 421 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 RPL23AP33-201ENST00000442301 452 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 Z75741.1-201ENST00000446793 314 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 SNORD11.1-201ENST00000459482 85 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 KLRA1P-201ENST00000503499 986 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 AC110794.1-201ENST00000505816 425 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 RNU6-311P-201ENST00000516224 102 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 RN7SKP116-201ENST00000516902 319 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 RNU4-60P-201ENST00000517239 135 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 IGKV2D-36-201ENST00000518643 226 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 AP001189.2-201ENST00000527320 189 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 OR4A45P-201ENST00000529954 901 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 AC005476.1-201ENST00000554427 397 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 CENPUP2-201ENST00000555897 1186 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 AL121576.1-201ENST00000556055 276 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 OR4G1P-201ENST00000588632 938 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 AC012493.2-201ENST00000595083 291 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 BNIP3P26-201ENST00000600827 554 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 AL390838.2-201ENST00000602394 274 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 AC006254.3-201ENST00000603353 884 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 LLPHP1-201ENST00000603571 367 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 AC007566.2-201ENST00000603642 413 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 AP001521.1-201ENST00000609150 300 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 AC005332.6-201ENST00000613178 446 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 MIR8057-201ENST00000620957 69 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 AC022509.4-201ENST00000621404 572 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 AC090897.3-201ENST00000636973 1157 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NEDD8-MDP1E9PL57 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 NACA3P-201ENST00000359690 648 ntBASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 RNU5D-1-201ENST00000363299 116 ntBASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 MIR513B-201ENST00000385136 84 ntBASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 ANAPC10P1-201ENST00000395991 556 ntBASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 AL357075.1-201ENST00000404107 726 ntBASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 AL450338.1-201ENST00000407987 512 ntBASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 ELOCP9-201ENST00000418624 239 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms