Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PALM3A6NDB9 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.2□□□□□ -1.42
PALM3A6NDB9 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PALM3A6NDB9 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PALM3A6NDB9 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
PALM3A6NDB9 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
PALM3A6NDB9 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
PALM3A6NDB9 AC103710.2-202ENST00000641454 2853 ntBASIC6.2□□□□□ -1.42
PALM3A6NDB9 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PALM3A6NDB9 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PALM3A6NDB9 DDX10P1-201ENST00000448545 1933 ntBASIC6.19□□□□□ -1.42
PALM3A6NDB9 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.19□□□□□ -1.42
PALM3A6NDB9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
PALM3A6NDB9 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PALM3A6NDB9 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PALM3A6NDB9 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PALM3A6NDB9 RNA5SP453-201ENST00000362503 119 ntBASIC6.19□□□□□ -1.42
PALM3A6NDB9 RNU6-1252P-201ENST00000363054 104 ntBASIC6.19□□□□□ -1.42
PALM3A6NDB9 CYB5AP4-201ENST00000396692 399 ntBASIC6.19□□□□□ -1.42
PALM3A6NDB9 AL591848.1-201ENST00000413092 322 ntBASIC6.19□□□□□ -1.42
PALM3A6NDB9 AC016769.2-201ENST00000414815 475 ntBASIC6.19□□□□□ -1.42
PALM3A6NDB9 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC6.19□□□□□ -1.42
PALM3A6NDB9 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC6.19□□□□□ -1.42
PALM3A6NDB9 UBE2FP1-201ENST00000416536 447 ntBASIC6.19□□□□□ -1.42
PALM3A6NDB9 LAMTOR3P1-201ENST00000428620 370 ntBASIC6.19□□□□□ -1.42
PALM3A6NDB9 RPL32P28-201ENST00000443577 397 ntBASIC6.19□□□□□ -1.42
PALM3A6NDB9 TPT1P13-201ENST00000449760 499 ntBASIC6.19□□□□□ -1.42
PALM3A6NDB9 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC6.19□□□□□ -1.42
PALM3A6NDB9 RN7SL172P-201ENST00000460535 303 ntBASIC6.19□□□□□ -1.42
PALM3A6NDB9 RN7SL799P-201ENST00000475891 298 ntBASIC6.19□□□□□ -1.42
PALM3A6NDB9 TAF8-207ENST00000482432 556 ntTSL 2 BASIC6.19□□□□□ -1.42
PALM3A6NDB9 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.19□□□□□ -1.42
PALM3A6NDB9 AC108078.2-201ENST00000510750 236 ntBASIC6.19□□□□□ -1.42
PALM3A6NDB9 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC6.19□□□□□ -1.42
PALM3A6NDB9 RN7SKP24-201ENST00000515888 284 ntBASIC6.19□□□□□ -1.42
PALM3A6NDB9 RNU6-988P-201ENST00000519081 107 ntBASIC6.19□□□□□ -1.42
PALM3A6NDB9 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.19□□□□□ -1.42
PALM3A6NDB9 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.19□□□□□ -1.42
PALM3A6NDB9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC6.19□□□□□ -1.42
PALM3A6NDB9 MIR4790-201ENST00000577799 79 ntBASIC6.19□□□□□ -1.42
PALM3A6NDB9 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC6.19□□□□□ -1.42
PALM3A6NDB9 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.19□□□□□ -1.42
PALM3A6NDB9 OR7E18P-201ENST00000592589 702 ntBASIC6.19□□□□□ -1.42
PALM3A6NDB9 AC010632.3-201ENST00000611377 369 ntBASIC6.19□□□□□ -1.42
PALM3A6NDB9 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC6.19□□□□□ -1.42
PALM3A6NDB9 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.19□□□□□ -1.42
PALM3A6NDB9 AC135068.12-201ENST00000637370 931 ntBASIC6.19□□□□□ -1.42
PALM3A6NDB9 OR52H1-202ENST00000641796 1061 ntBASIC6.19□□□□□ -1.42
PALM3A6NDB9 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
PALM3A6NDB9 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PALM3A6NDB9 MAPK10-338ENST00000641647 3362 ntBASIC6.19□□□□□ -1.42
PALM3A6NDB9 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PALM3A6NDB9 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.18□□□□□ -1.42
PALM3A6NDB9 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PALM3A6NDB9 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
PALM3A6NDB9 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PALM3A6NDB9 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
PALM3A6NDB9 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
PALM3A6NDB9 MDM4-202ENST00000367180 547 ntTSL 3 BASIC6.18□□□□□ -1.42
PALM3A6NDB9 Y_RNA.493-201ENST00000384422 102 ntBASIC6.18□□□□□ -1.42
PALM3A6NDB9 SOD2P1-201ENST00000396543 562 ntBASIC6.18□□□□□ -1.42
PALM3A6NDB9 RN7SKP158-201ENST00000410453 326 ntBASIC6.18□□□□□ -1.42
PALM3A6NDB9 AC113618.1-201ENST00000416747 285 ntBASIC6.18□□□□□ -1.42
PALM3A6NDB9 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.18□□□□□ -1.42
PALM3A6NDB9 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC6.18□□□□□ -1.42
PALM3A6NDB9 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.18□□□□□ -1.42
PALM3A6NDB9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC6.18□□□□□ -1.42
PALM3A6NDB9 RPL21P8-201ENST00000465083 535 ntBASIC6.18□□□□□ -1.42
PALM3A6NDB9 HMGB1P25-201ENST00000468402 607 ntBASIC6.18□□□□□ -1.42
PALM3A6NDB9 RN7SL222P-201ENST00000476452 299 ntBASIC6.18□□□□□ -1.42
PALM3A6NDB9 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.18□□□□□ -1.42
PALM3A6NDB9 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.18□□□□□ -1.42
PALM3A6NDB9 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.18□□□□□ -1.42
PALM3A6NDB9 CCDC34P1-201ENST00000507441 517 ntBASIC6.18□□□□□ -1.42
PALM3A6NDB9 RNU6-566P-201ENST00000516790 107 ntBASIC6.18□□□□□ -1.42
PALM3A6NDB9 RANP3-201ENST00000530970 276 ntBASIC6.18□□□□□ -1.42
PALM3A6NDB9 AC018630.1-201ENST00000541376 925 ntBASIC6.18□□□□□ -1.42
PALM3A6NDB9 MIR7853-201ENST00000584820 132 ntBASIC6.18□□□□□ -1.42
PALM3A6NDB9 Z82243.1-201ENST00000609432 473 ntBASIC6.18□□□□□ -1.42
PALM3A6NDB9 uc_338.22-201ENST00000622722 187 ntBASIC6.18□□□□□ -1.42
PALM3A6NDB9 AC091925.1-201ENST00000623204 462 ntBASIC6.18□□□□□ -1.42
PALM3A6NDB9 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.18□□□□□ -1.42
PALM3A6NDB9 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PALM3A6NDB9 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PALM3A6NDB9 AC097063.1-201ENST00000426714 1797 ntBASIC6.18□□□□□ -1.42
PALM3A6NDB9 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PALM3A6NDB9 AL137003.2-201ENST00000606924 2538 ntBASIC6.18□□□□□ -1.42
PALM3A6NDB9 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PALM3A6NDB9 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PALM3A6NDB9 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
PALM3A6NDB9 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PALM3A6NDB9 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.17□□□□□ -1.42
PALM3A6NDB9 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PALM3A6NDB9 ZNF33CP-201ENST00000432492 2030 ntBASIC6.17□□□□□ -1.42
PALM3A6NDB9 RN7SKP145-201ENST00000363291 303 ntBASIC6.17□□□□□ -1.42
PALM3A6NDB9 Y_RNA.133-201ENST00000363428 110 ntBASIC6.17□□□□□ -1.42
PALM3A6NDB9 RNU6-1105P-201ENST00000384774 107 ntBASIC6.17□□□□□ -1.42
PALM3A6NDB9 MIR223-201ENST00000385204 110 ntBASIC6.17□□□□□ -1.42
PALM3A6NDB9 EIF4E2P1-201ENST00000393781 255 ntBASIC6.17□□□□□ -1.42
PALM3A6NDB9 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms