Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.08□□□□□ -1.6
PTPDC1A2A3K4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.08□□□□□ -1.6
PTPDC1A2A3K4 AC092954.2-201ENST00000609103 430 ntBASIC5.08□□□□□ -1.6
PTPDC1A2A3K4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.08□□□□□ -1.6
PTPDC1A2A3K4 AL445567.2-201ENST00000618935 498 ntBASIC5.08□□□□□ -1.6
PTPDC1A2A3K4 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.08□□□□□ -1.6
PTPDC1A2A3K4 FAM157B-203ENST00000639350 358 ntBASIC5.08□□□□□ -1.6
PTPDC1A2A3K4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.08□□□□□ -1.6
PTPDC1A2A3K4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTPDC1A2A3K4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 RNU6-867P-201ENST00000364956 107 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 RNU6-730P-201ENST00000383954 104 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 RNY3P14-201ENST00000384309 102 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 SNORD66.1-201ENST00000391230 76 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 MTCO3P40-201ENST00000392516 676 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 AL583835.1-201ENST00000399570 407 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 RNU6-195P-201ENST00000411352 109 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 RPL31P2-201ENST00000413849 377 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 AC245052.5-201ENST00000416320 649 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 RPS15AP40-201ENST00000419621 391 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 OR4F13P-201ENST00000428478 931 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 RPL12P46-201ENST00000436610 195 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 MTCO3P20-201ENST00000454926 688 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 RPS20P32-201ENST00000456044 356 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 RPS26P28-201ENST00000470806 348 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 PRDX4P1-201ENST00000507189 574 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 PGBD4P4-201ENST00000509673 613 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 PARP4P3-201ENST00000510265 317 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 MTND6P33-201ENST00000571794 183 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 MIR4512-201ENST00000583257 77 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 AL020997.2-201ENST00000602607 184 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 AC245014.2-201ENST00000603689 287 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 AC246785.4-201ENST00000605374 287 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 AC023043.4-201ENST00000612081 449 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 uc_338.13-201ENST00000618243 179 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 AL359880.1-201ENST00000621879 266 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 AC019278.1-201ENST00000623516 479 ntBASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PTPDC1A2A3K4 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 AC083843.3-201ENST00000623679 2186 ntBASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 SAGE2P-201ENST00000420011 2126 ntBASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 AC009951.1-201ENST00000623674 2614 ntBASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 FRG1BP-201ENST00000278882 761 ntBASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 SNORD82-201ENST00000365530 70 ntBASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 Y_RNA.372-201ENST00000365599 102 ntBASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 AL356421.1-201ENST00000403255 413 ntBASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 AL590002.1-201ENST00000406554 418 ntBASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 PSMA6P3-201ENST00000428242 164 ntBASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 AL451074.3-201ENST00000437709 472 ntBASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 WASF1P1-201ENST00000447560 1131 ntBASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 UQCRHP4-201ENST00000471686 272 ntBASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 SAP18P1-201ENST00000512058 390 ntBASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 ARL2BPP6-201ENST00000512757 439 ntBASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 AC010493.1-201ENST00000513479 292 ntBASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 AC010342.1-201ENST00000514047 877 ntBASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 MTCO1P35-201ENST00000515270 228 ntBASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 MRPL49P2-201ENST00000521066 465 ntBASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 RN7SL176P-201ENST00000580352 264 ntBASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 MIR548S-201ENST00000581352 82 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms