Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC32.87■■■□□ 2.85
TRIM41Q8WV44 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC32.87■■■□□ 2.85
TRIM41Q8WV44 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
TRIM41Q8WV44 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
TRIM41Q8WV44 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC32.87■■■□□ 2.85
TRIM41Q8WV44 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC32.87■■■□□ 2.85
TRIM41Q8WV44 AC011506.1-201ENST00000474329 610 ntBASIC32.87■■■□□ 2.85
TRIM41Q8WV44 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC32.87■■■□□ 2.85
TRIM41Q8WV44 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC32.87■■■□□ 2.85
TRIM41Q8WV44 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC32.87■■■□□ 2.85
TRIM41Q8WV44 AL139424.1-201ENST00000607572 797 ntBASIC32.87■■■□□ 2.85
TRIM41Q8WV44 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC32.87■■■□□ 2.85
TRIM41Q8WV44 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
TRIM41Q8WV44 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC32.87■■■□□ 2.85
TRIM41Q8WV44 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC32.87■■■□□ 2.85
TRIM41Q8WV44 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
TRIM41Q8WV44 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
TRIM41Q8WV44 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC32.86■■■□□ 2.85
TRIM41Q8WV44 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC32.86■■■□□ 2.85
TRIM41Q8WV44 VENTXP5-201ENST00000523979 775 ntBASIC32.86■■■□□ 2.85
TRIM41Q8WV44 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC32.86■■■□□ 2.85
TRIM41Q8WV44 AC092119.3-201ENST00000612618 583 ntBASIC32.86■■■□□ 2.85
TRIM41Q8WV44 BCL10-202ENST00000620248 774 ntTSL 5 BASIC32.86■■■□□ 2.85
TRIM41Q8WV44 LINC01465-201ENST00000408887 1940 ntBASIC32.86■■■□□ 2.85
TRIM41Q8WV44 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC32.86■■■□□ 2.85
TRIM41Q8WV44 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
TRIM41Q8WV44 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC32.86■■■□□ 2.85
TRIM41Q8WV44 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
TRIM41Q8WV44 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
TRIM41Q8WV44 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
TRIM41Q8WV44 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC32.85■■■□□ 2.85
TRIM41Q8WV44 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC32.85■■■□□ 2.85
TRIM41Q8WV44 B3GAT3P1-201ENST00000471720 806 ntBASIC32.85■■■□□ 2.85
TRIM41Q8WV44 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC32.85■■■□□ 2.85
TRIM41Q8WV44 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC32.85■■■□□ 2.85
TRIM41Q8WV44 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC32.85■■■□□ 2.85
TRIM41Q8WV44 AC131212.4-201ENST00000623606 975 ntBASIC32.85■■■□□ 2.85
TRIM41Q8WV44 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
TRIM41Q8WV44 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC32.85■■■□□ 2.85
TRIM41Q8WV44 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC32.85■■■□□ 2.85
TRIM41Q8WV44 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
TRIM41Q8WV44 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC32.84■■■□□ 2.85
TRIM41Q8WV44 PCDHAC2-203ENST00000615316 3011 ntBASIC32.84■■■□□ 2.85
TRIM41Q8WV44 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
TRIM41Q8WV44 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC32.84■■■□□ 2.85
TRIM41Q8WV44 AC092865.5-201ENST00000545435 363 ntBASIC32.84■■■□□ 2.85
TRIM41Q8WV44 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC32.84■■■□□ 2.85
TRIM41Q8WV44 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC32.84■■■□□ 2.85
TRIM41Q8WV44 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC32.84■■■□□ 2.85
TRIM41Q8WV44 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC32.84■■■□□ 2.85
TRIM41Q8WV44 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC32.84■■■□□ 2.85
TRIM41Q8WV44 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC32.84■■■□□ 2.85
TRIM41Q8WV44 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC32.83■■■□□ 2.85
TRIM41Q8WV44 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
TRIM41Q8WV44 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC32.83■■■□□ 2.85
TRIM41Q8WV44 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC32.83■■■□□ 2.85
TRIM41Q8WV44 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
TRIM41Q8WV44 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC32.83■■■□□ 2.85
TRIM41Q8WV44 HMGA1P5-201ENST00000412453 271 ntBASIC32.83■■■□□ 2.85
TRIM41Q8WV44 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC32.83■■■□□ 2.85
TRIM41Q8WV44 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC32.83■■■□□ 2.85
TRIM41Q8WV44 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
TRIM41Q8WV44 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC32.83■■■□□ 2.85
TRIM41Q8WV44 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
TRIM41Q8WV44 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
TRIM41Q8WV44 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
TRIM41Q8WV44 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC32.82■■■□□ 2.84
TRIM41Q8WV44 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC32.82■■■□□ 2.84
TRIM41Q8WV44 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC32.82■■■□□ 2.84
TRIM41Q8WV44 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC32.82■■■□□ 2.84
TRIM41Q8WV44 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC32.82■■■□□ 2.84
TRIM41Q8WV44 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
TRIM41Q8WV44 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC32.82■■■□□ 2.84
TRIM41Q8WV44 DAP-202ENST00000432074 1048 ntTSL 2 BASIC32.82■■■□□ 2.84
TRIM41Q8WV44 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
TRIM41Q8WV44 AC104692.2-201ENST00000603054 253 ntBASIC32.82■■■□□ 2.84
TRIM41Q8WV44 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC32.82■■■□□ 2.84
TRIM41Q8WV44 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
TRIM41Q8WV44 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
TRIM41Q8WV44 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC32.82■■■□□ 2.84
TRIM41Q8WV44 FSCN1P1-201ENST00000568912 1481 ntBASIC32.81■■■□□ 2.84
TRIM41Q8WV44 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC32.81■■■□□ 2.84
TRIM41Q8WV44 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC32.81■■■□□ 2.84
TRIM41Q8WV44 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
TRIM41Q8WV44 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
TRIM41Q8WV44 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC32.81■■■□□ 2.84
TRIM41Q8WV44 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
TRIM41Q8WV44 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC32.81■■■□□ 2.84
TRIM41Q8WV44 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC32.81■■■□□ 2.84
TRIM41Q8WV44 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC32.81■■■□□ 2.84
TRIM41Q8WV44 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
TRIM41Q8WV44 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
TRIM41Q8WV44 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC32.81■■■□□ 2.84
TRIM41Q8WV44 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC32.81■■■□□ 2.84
TRIM41Q8WV44 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
TRIM41Q8WV44 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC32.81■■■□□ 2.84
TRIM41Q8WV44 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC32.8■■■□□ 2.84
TRIM41Q8WV44 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
TRIM41Q8WV44 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
TRIM41Q8WV44 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC32.8■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms