Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
CHMP7Q8WUX9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHMP7Q8WUX9 GRAMD4P1-201ENST00000435181 1110 ntBASIC31.19■■■□□ 2.58
CHMP7Q8WUX9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHMP7Q8WUX9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHMP7Q8WUX9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHMP7Q8WUX9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHMP7Q8WUX9 KRT18P58-201ENST00000527480 1120 ntBASIC31.19■■■□□ 2.58
CHMP7Q8WUX9 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC31.19■■■□□ 2.58
CHMP7Q8WUX9 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHMP7Q8WUX9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC31.19■■■□□ 2.58
CHMP7Q8WUX9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHMP7Q8WUX9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CHMP7Q8WUX9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC31.18■■■□□ 2.58
CHMP7Q8WUX9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CHMP7Q8WUX9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CHMP7Q8WUX9 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CHMP7Q8WUX9 BAALC-202ENST00000306391 243 ntTSL 5 BASIC31.18■■■□□ 2.58
CHMP7Q8WUX9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CHMP7Q8WUX9 BAALC-204ENST00000330955 222 ntTSL 5 BASIC31.18■■■□□ 2.58
CHMP7Q8WUX9 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC31.18■■■□□ 2.58
CHMP7Q8WUX9 SAPCD2P3-201ENST00000455031 850 ntBASIC31.18■■■□□ 2.58
CHMP7Q8WUX9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC31.18■■■□□ 2.58
CHMP7Q8WUX9 MIR3917-201ENST00000580971 93 ntBASIC31.18■■■□□ 2.58
CHMP7Q8WUX9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC31.18■■■□□ 2.58
CHMP7Q8WUX9 TP73-AS1-207ENST00000624167 988 ntBASIC31.18■■■□□ 2.58
CHMP7Q8WUX9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CHMP7Q8WUX9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC31.18■■■□□ 2.58
CHMP7Q8WUX9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHMP7Q8WUX9 Z83836.1-201ENST00000624605 1642 ntBASIC31.17■■■□□ 2.58
CHMP7Q8WUX9 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC31.17■■■□□ 2.58
CHMP7Q8WUX9 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CHMP7Q8WUX9 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
CHMP7Q8WUX9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC31.17■■■□□ 2.58
CHMP7Q8WUX9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC31.17■■■□□ 2.58
CHMP7Q8WUX9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC31.17■■■□□ 2.58
CHMP7Q8WUX9 AC064862.7-201ENST00000604520 867 ntBASIC31.17■■■□□ 2.58
CHMP7Q8WUX9 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC31.17■■■□□ 2.58
CHMP7Q8WUX9 REXO1L6P-202ENST00000619970 1078 ntBASIC31.17■■■□□ 2.58
CHMP7Q8WUX9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
CHMP7Q8WUX9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
CHMP7Q8WUX9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
CHMP7Q8WUX9 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CHMP7Q8WUX9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC31.17■■■□□ 2.58
CHMP7Q8WUX9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC31.17■■■□□ 2.58
CHMP7Q8WUX9 AC233702.3-201ENST00000578656 1387 ntBASIC31.17■■■□□ 2.58
CHMP7Q8WUX9 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CHMP7Q8WUX9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC31.16■■■□□ 2.58
CHMP7Q8WUX9 ANKRD18DP-204ENST00000455355 1975 ntBASIC31.16■■■□□ 2.58
CHMP7Q8WUX9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC31.16■■■□□ 2.58
CHMP7Q8WUX9 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC31.16■■■□□ 2.58
CHMP7Q8WUX9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC31.16■■■□□ 2.58
CHMP7Q8WUX9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC31.16■■■□□ 2.58
CHMP7Q8WUX9 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CHMP7Q8WUX9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
CHMP7Q8WUX9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CHMP7Q8WUX9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CHMP7Q8WUX9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CHMP7Q8WUX9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CHMP7Q8WUX9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CHMP7Q8WUX9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHMP7Q8WUX9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHMP7Q8WUX9 TLE1-202ENST00000376484 666 ntTSL 3 BASIC31.15■■■□□ 2.58
CHMP7Q8WUX9 AL023284.2-201ENST00000405850 579 ntBASIC31.15■■■□□ 2.58
CHMP7Q8WUX9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CHMP7Q8WUX9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
CHMP7Q8WUX9 AF238378.1-201ENST00000526806 358 ntBASIC31.15■■■□□ 2.58
CHMP7Q8WUX9 AC090616.6-201ENST00000582640 721 ntBASIC31.15■■■□□ 2.58
CHMP7Q8WUX9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC31.15■■■□□ 2.58
CHMP7Q8WUX9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC31.15■■■□□ 2.58
CHMP7Q8WUX9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC31.15■■■□□ 2.58
CHMP7Q8WUX9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHMP7Q8WUX9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
CHMP7Q8WUX9 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CHMP7Q8WUX9 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CHMP7Q8WUX9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CHMP7Q8WUX9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC31.14■■■□□ 2.58
CHMP7Q8WUX9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
CHMP7Q8WUX9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CHMP7Q8WUX9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
CHMP7Q8WUX9 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC31.14■■■□□ 2.58
CHMP7Q8WUX9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CHMP7Q8WUX9 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC31.14■■■□□ 2.58
CHMP7Q8WUX9 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC31.14■■■□□ 2.58
CHMP7Q8WUX9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
CHMP7Q8WUX9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CHMP7Q8WUX9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CHMP7Q8WUX9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC31.14■■■□□ 2.58
CHMP7Q8WUX9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
CHMP7Q8WUX9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CHMP7Q8WUX9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC31.13■■■□□ 2.57
CHMP7Q8WUX9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CHMP7Q8WUX9 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC31.13■■■□□ 2.57
CHMP7Q8WUX9 MOK-208ENST00000519058 917 ntTSL 2 BASIC31.13■■■□□ 2.57
CHMP7Q8WUX9 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CHMP7Q8WUX9 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC31.13■■■□□ 2.57
CHMP7Q8WUX9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC31.12■■■□□ 2.57
CHMP7Q8WUX9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CHMP7Q8WUX9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CHMP7Q8WUX9 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms