Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps53Q8CCB4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps53Q8CCB4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps53Q8CCB4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps53Q8CCB4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps53Q8CCB4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps53Q8CCB4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps53Q8CCB4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps53Q8CCB4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Vps53Q8CCB4 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps53Q8CCB4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Vps53Q8CCB4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps53Q8CCB4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps53Q8CCB4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Vps53Q8CCB4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.03■□□□□ 0.64
Vps53Q8CCB4 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps53Q8CCB4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps53Q8CCB4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps53Q8CCB4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Vps53Q8CCB4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps53Q8CCB4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps53Q8CCB4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.02■□□□□ 0.64
Vps53Q8CCB4 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps53Q8CCB4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps53Q8CCB4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps53Q8CCB4 Mir3081-201ENSMUST00000175305 84 ntBASIC19.02■□□□□ 0.64
Vps53Q8CCB4 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.02■□□□□ 0.64
Vps53Q8CCB4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps53Q8CCB4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps53Q8CCB4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps53Q8CCB4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Vps53Q8CCB4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Vps53Q8CCB4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Vps53Q8CCB4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Vps53Q8CCB4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vps53Q8CCB4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vps53Q8CCB4 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vps53Q8CCB4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vps53Q8CCB4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps53Q8CCB4 Gm36858-201ENSMUST00000194501 2391 ntBASIC19■□□□□ 0.63
Vps53Q8CCB4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19■□□□□ 0.63
Vps53Q8CCB4 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps53Q8CCB4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Vps53Q8CCB4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19■□□□□ 0.63
Vps53Q8CCB4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps53Q8CCB4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19■□□□□ 0.63
Vps53Q8CCB4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19■□□□□ 0.63
Vps53Q8CCB4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19■□□□□ 0.63
Vps53Q8CCB4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19■□□□□ 0.63
Vps53Q8CCB4 Otx2os1-206ENSMUST00000228153 787 ntBASIC19■□□□□ 0.63
Vps53Q8CCB4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19■□□□□ 0.63
Vps53Q8CCB4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Vps53Q8CCB4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19■□□□□ 0.63
Vps53Q8CCB4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps53Q8CCB4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19■□□□□ 0.63
Vps53Q8CCB4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps53Q8CCB4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps53Q8CCB4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Vps53Q8CCB4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.99■□□□□ 0.63
Vps53Q8CCB4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.99■□□□□ 0.63
Vps53Q8CCB4 Gm6623-201ENSMUST00000173570 544 ntBASIC18.99■□□□□ 0.63
Vps53Q8CCB4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.99■□□□□ 0.63
Vps53Q8CCB4 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.99■□□□□ 0.63
Vps53Q8CCB4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Vps53Q8CCB4 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps53Q8CCB4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Vps53Q8CCB4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps53Q8CCB4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Vps53Q8CCB4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Vps53Q8CCB4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps53Q8CCB4 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms