Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gm29791-202ENSMUST00000207888 369 ntBASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Asic1-205ENSMUST00000228185 1818 ntBASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tsen54Q8C2A2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tsen54Q8C2A2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tsen54Q8C2A2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tsen54Q8C2A2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tsen54Q8C2A2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tsen54Q8C2A2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tsen54Q8C2A2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tsen54Q8C2A2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tsen54Q8C2A2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tsen54Q8C2A2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tsen54Q8C2A2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tsen54Q8C2A2 Gm18666-201ENSMUST00000190039 958 ntBASIC13.75□□□□□ -0.21
Tsen54Q8C2A2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tsen54Q8C2A2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tsen54Q8C2A2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Tsen54Q8C2A2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tsen54Q8C2A2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tsen54Q8C2A2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tsen54Q8C2A2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tsen54Q8C2A2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tsen54Q8C2A2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Gm13168-201ENSMUST00000121771 632 ntBASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Gm13158-201ENSMUST00000122007 736 ntBASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tsen54Q8C2A2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Tsen54Q8C2A2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tsen54Q8C2A2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tsen54Q8C2A2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Tsen54Q8C2A2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tsen54Q8C2A2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Tsen54Q8C2A2 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tsen54Q8C2A2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tsen54Q8C2A2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tsen54Q8C2A2 Gm10418-201ENSMUST00000100943 576 ntBASIC13.73□□□□□ -0.21
Tsen54Q8C2A2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tsen54Q8C2A2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tsen54Q8C2A2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tsen54Q8C2A2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tsen54Q8C2A2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tsen54Q8C2A2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tsen54Q8C2A2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tsen54Q8C2A2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tsen54Q8C2A2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tsen54Q8C2A2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tsen54Q8C2A2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tsen54Q8C2A2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tsen54Q8C2A2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tsen54Q8C2A2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tsen54Q8C2A2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tsen54Q8C2A2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tsen54Q8C2A2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tsen54Q8C2A2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Tsen54Q8C2A2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.72□□□□□ -0.21
Tsen54Q8C2A2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tsen54Q8C2A2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tsen54Q8C2A2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Tsen54Q8C2A2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Tsen54Q8C2A2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tsen54Q8C2A2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tsen54Q8C2A2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms