Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO4Q2I0M5 RNPS1P1-201ENST00000507437 918 ntBASIC18.6■□□□□ 0.57
RSPO4Q2I0M5 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.6■□□□□ 0.57
RSPO4Q2I0M5 AC074051.2-201ENST00000565115 352 ntBASIC18.6■□□□□ 0.57
RSPO4Q2I0M5 AC140113.2-201ENST00000604370 208 ntBASIC18.6■□□□□ 0.57
RSPO4Q2I0M5 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.6■□□□□ 0.57
RSPO4Q2I0M5 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.6■□□□□ 0.57
RSPO4Q2I0M5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO4Q2I0M5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO4Q2I0M5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO4Q2I0M5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO4Q2I0M5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.6■□□□□ 0.57
RSPO4Q2I0M5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.6■□□□□ 0.57
RSPO4Q2I0M5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.6■□□□□ 0.57
RSPO4Q2I0M5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RSPO4Q2I0M5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.6■□□□□ 0.57
RSPO4Q2I0M5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO4Q2I0M5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO4Q2I0M5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.59■□□□□ 0.57
RSPO4Q2I0M5 AC026310.3-201ENST00000625186 2373 ntBASIC18.59■□□□□ 0.57
RSPO4Q2I0M5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO4Q2I0M5 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.59■□□□□ 0.57
RSPO4Q2I0M5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO4Q2I0M5 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RSPO4Q2I0M5 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO4Q2I0M5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.59■□□□□ 0.57
RSPO4Q2I0M5 SAPCD2P3-201ENST00000455031 850 ntBASIC18.59■□□□□ 0.57
RSPO4Q2I0M5 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO4Q2I0M5 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.59■□□□□ 0.57
RSPO4Q2I0M5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO4Q2I0M5 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO4Q2I0M5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RSPO4Q2I0M5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO4Q2I0M5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO4Q2I0M5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RSPO4Q2I0M5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.59■□□□□ 0.57
RSPO4Q2I0M5 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RSPO4Q2I0M5 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RSPO4Q2I0M5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.58■□□□□ 0.57
RSPO4Q2I0M5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.58■□□□□ 0.57
RSPO4Q2I0M5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
RSPO4Q2I0M5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RSPO4Q2I0M5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
RSPO4Q2I0M5 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RSPO4Q2I0M5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
RSPO4Q2I0M5 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.58■□□□□ 0.57
RSPO4Q2I0M5 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RSPO4Q2I0M5 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RSPO4Q2I0M5 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.58■□□□□ 0.56
RSPO4Q2I0M5 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.58■□□□□ 0.56
RSPO4Q2I0M5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.58■□□□□ 0.56
RSPO4Q2I0M5 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.58■□□□□ 0.56
RSPO4Q2I0M5 AC055717.3-201ENST00000622967 595 ntBASIC18.58■□□□□ 0.56
RSPO4Q2I0M5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RSPO4Q2I0M5 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RSPO4Q2I0M5 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.58■□□□□ 0.56
RSPO4Q2I0M5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RSPO4Q2I0M5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
RSPO4Q2I0M5 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.58■□□□□ 0.56
RSPO4Q2I0M5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RSPO4Q2I0M5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RSPO4Q2I0M5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.57■□□□□ 0.56
RSPO4Q2I0M5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RSPO4Q2I0M5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RSPO4Q2I0M5 TMEM179-206ENST00000616017 1645 ntBASIC18.57■□□□□ 0.56
RSPO4Q2I0M5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RSPO4Q2I0M5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RSPO4Q2I0M5 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RSPO4Q2I0M5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RSPO4Q2I0M5 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.57■□□□□ 0.56
RSPO4Q2I0M5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RSPO4Q2I0M5 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RSPO4Q2I0M5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.57■□□□□ 0.56
RSPO4Q2I0M5 MIR4674-201ENST00000582457 87 ntBASIC18.57■□□□□ 0.56
RSPO4Q2I0M5 AC099336.1-202ENST00000602961 463 ntBASIC18.57■□□□□ 0.56
RSPO4Q2I0M5 AC024243.1-201ENST00000609234 778 ntBASIC18.57■□□□□ 0.56
RSPO4Q2I0M5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RSPO4Q2I0M5 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RSPO4Q2I0M5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.57■□□□□ 0.56
RSPO4Q2I0M5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RSPO4Q2I0M5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RSPO4Q2I0M5 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RSPO4Q2I0M5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RSPO4Q2I0M5 PHGDH-210ENST00000641115 1638 ntBASIC18.56■□□□□ 0.56
RSPO4Q2I0M5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.56■□□□□ 0.56
RSPO4Q2I0M5 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RSPO4Q2I0M5 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.56■□□□□ 0.56
RSPO4Q2I0M5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RSPO4Q2I0M5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RSPO4Q2I0M5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.56■□□□□ 0.56
RSPO4Q2I0M5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.56■□□□□ 0.56
RSPO4Q2I0M5 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RSPO4Q2I0M5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.56■□□□□ 0.56
RSPO4Q2I0M5 AC073648.2-201ENST00000510116 352 ntBASIC18.56■□□□□ 0.56
RSPO4Q2I0M5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.56■□□□□ 0.56
RSPO4Q2I0M5 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.56■□□□□ 0.56
RSPO4Q2I0M5 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RSPO4Q2I0M5 TP73-AS1-207ENST00000624167 988 ntBASIC18.56■□□□□ 0.56
RSPO4Q2I0M5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RSPO4Q2I0M5 AF106564.1-201ENST00000607058 2553 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms