Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC33.86■■■■□ 3.01
HMGXB3Q12766 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC33.86■■■■□ 3.01
HMGXB3Q12766 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC33.86■■■■□ 3.01
HMGXB3Q12766 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
HMGXB3Q12766 AL590627.1-203ENST00000421194 1026 ntBASIC33.85■■■■□ 3.01
HMGXB3Q12766 BET1L-206ENST00000486280 665 ntTSL 3 BASIC33.85■■■■□ 3.01
HMGXB3Q12766 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
HMGXB3Q12766 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC33.85■■■■□ 3.01
HMGXB3Q12766 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC33.84■■■■□ 3.01
HMGXB3Q12766 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC33.84■■■■□ 3.01
HMGXB3Q12766 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC33.84■■■■□ 3.01
HMGXB3Q12766 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC33.84■■■■□ 3.01
HMGXB3Q12766 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC33.84■■■■□ 3.01
HMGXB3Q12766 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC33.84■■■■□ 3.01
HMGXB3Q12766 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC33.84■■■■□ 3.01
HMGXB3Q12766 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC33.84■■■■□ 3.01
HMGXB3Q12766 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC33.84■■■■□ 3.01
HMGXB3Q12766 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC33.84■■■■□ 3.01
HMGXB3Q12766 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC33.84■■■■□ 3.01
HMGXB3Q12766 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
HMGXB3Q12766 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
HMGXB3Q12766 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC33.84■■■■□ 3.01
HMGXB3Q12766 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC33.84■■■■□ 3.01
HMGXB3Q12766 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC33.84■■■■□ 3.01
HMGXB3Q12766 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC33.83■■■■□ 3.01
HMGXB3Q12766 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC33.83■■■■□ 3.01
HMGXB3Q12766 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC33.83■■■■□ 3.01
HMGXB3Q12766 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
HMGXB3Q12766 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC33.83■■■■□ 3.01
HMGXB3Q12766 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC33.83■■■■□ 3.01
HMGXB3Q12766 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
HMGXB3Q12766 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC33.83■■■■□ 3.01
HMGXB3Q12766 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC33.83■■■■□ 3.01
HMGXB3Q12766 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC33.83■■■■□ 3.01
HMGXB3Q12766 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC33.83■■■■□ 3.01
HMGXB3Q12766 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC33.83■■■■□ 3.01
HMGXB3Q12766 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
HMGXB3Q12766 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC33.83■■■■□ 3.01
HMGXB3Q12766 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC33.83■■■■□ 3.01
HMGXB3Q12766 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC33.83■■■■□ 3.01
HMGXB3Q12766 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC33.82■■■■□ 3.01
HMGXB3Q12766 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC33.82■■■■□ 3.01
HMGXB3Q12766 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3.01
HMGXB3Q12766 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC33.82■■■■□ 3.01
HMGXB3Q12766 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
HMGXB3Q12766 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
HMGXB3Q12766 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC33.82■■■■□ 3
HMGXB3Q12766 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC33.82■■■■□ 3
HMGXB3Q12766 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC33.82■■■■□ 3
HMGXB3Q12766 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC33.82■■■■□ 3
HMGXB3Q12766 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC33.82■■■■□ 3
HMGXB3Q12766 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC33.82■■■■□ 3
HMGXB3Q12766 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC33.82■■■■□ 3
HMGXB3Q12766 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
HMGXB3Q12766 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
HMGXB3Q12766 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC33.82■■■■□ 3
HMGXB3Q12766 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC33.81■■■■□ 3
HMGXB3Q12766 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
HMGXB3Q12766 IGHV3-47-201ENST00000425060 335 ntBASIC33.81■■■■□ 3
HMGXB3Q12766 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC33.81■■■■□ 3
HMGXB3Q12766 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC33.81■■■■□ 3
HMGXB3Q12766 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC33.81■■■■□ 3
HMGXB3Q12766 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC33.81■■■■□ 3
HMGXB3Q12766 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC33.81■■■■□ 3
HMGXB3Q12766 AP001005.1-201ENST00000571755 1248 ntBASIC33.81■■■■□ 3
HMGXB3Q12766 LINC01711-201ENST00000598340 967 ntBASIC33.81■■■■□ 3
HMGXB3Q12766 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC33.81■■■■□ 3
HMGXB3Q12766 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
HMGXB3Q12766 BID-212ENST00000614949 1988 ntTSL 5 BASIC33.81■■■■□ 3
HMGXB3Q12766 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
HMGXB3Q12766 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC33.81■■■■□ 3
HMGXB3Q12766 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC33.81■■■■□ 3
HMGXB3Q12766 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
HMGXB3Q12766 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC33.81■■■■□ 3
HMGXB3Q12766 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC33.8■■■■□ 3
HMGXB3Q12766 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC33.8■■■■□ 3
HMGXB3Q12766 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC33.8■■■■□ 3
HMGXB3Q12766 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC33.8■■■■□ 3
HMGXB3Q12766 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC33.8■■■■□ 3
HMGXB3Q12766 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC33.8■■■■□ 3
HMGXB3Q12766 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC33.8■■■■□ 3
HMGXB3Q12766 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC33.8■■■■□ 3
HMGXB3Q12766 Z83836.1-201ENST00000624605 1642 ntBASIC33.8■■■■□ 3
HMGXB3Q12766 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
HMGXB3Q12766 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
HMGXB3Q12766 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC33.79■■■■□ 3
HMGXB3Q12766 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC33.79■■■■□ 3
HMGXB3Q12766 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC33.79■■■■□ 3
HMGXB3Q12766 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC33.79■■■■□ 3
HMGXB3Q12766 AC099336.1-202ENST00000602961 463 ntBASIC33.79■■■■□ 3
HMGXB3Q12766 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC33.79■■■■□ 3
HMGXB3Q12766 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
HMGXB3Q12766 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC33.79■■■■□ 3
HMGXB3Q12766 MCCD1P1-208ENST00000445732 328 ntBASIC33.79■■■■□ 3
HMGXB3Q12766 AC092183.1-201ENST00000469884 875 ntBASIC33.79■■■■□ 3
HMGXB3Q12766 CDV3-207ENST00000508481 661 ntTSL 3 BASIC33.79■■■■□ 3
HMGXB3Q12766 AL773604.1-201ENST00000617417 272 ntBASIC33.79■■■■□ 3
HMGXB3Q12766 AF228730.7-201ENST00000641842 219 ntBASIC33.79■■■■□ 3
HMGXB3Q12766 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC33.79■■■■□ 3
HMGXB3Q12766 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC33.78■■■■□ 3
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms