Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.68■■□□□ 1.06
CENPFP49454 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CENPFP49454 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CENPFP49454 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.68■■□□□ 1.06
CENPFP49454 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
CENPFP49454 AC091304.2-201ENST00000564639 760 ntBASIC21.68■■□□□ 1.06
CENPFP49454 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.68■■□□□ 1.06
CENPFP49454 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CENPFP49454 AC121338.2-201ENST00000622535 1744 ntBASIC21.68■■□□□ 1.06
CENPFP49454 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.68■■□□□ 1.06
CENPFP49454 AC007225.1-201ENST00000566331 1836 ntBASIC21.68■■□□□ 1.06
CENPFP49454 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CENPFP49454 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.68■■□□□ 1.06
CENPFP49454 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CENPFP49454 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CENPFP49454 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.67■■□□□ 1.06
CENPFP49454 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CENPFP49454 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.67■■□□□ 1.06
CENPFP49454 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CENPFP49454 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CENPFP49454 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CENPFP49454 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CENPFP49454 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CENPFP49454 MIR4674-201ENST00000582457 87 ntBASIC21.67■■□□□ 1.06
CENPFP49454 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.67■■□□□ 1.06
CENPFP49454 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CENPFP49454 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CENPFP49454 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CENPFP49454 AL590627.1-203ENST00000421194 1026 ntBASIC21.67■■□□□ 1.06
CENPFP49454 DRAXINP1-201ENST00000437611 948 ntBASIC21.67■■□□□ 1.06
CENPFP49454 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CENPFP49454 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CENPFP49454 AL121912.1-201ENST00000603683 238 ntBASIC21.67■■□□□ 1.06
CENPFP49454 AL355385.1-201ENST00000606123 409 ntBASIC21.67■■□□□ 1.06
CENPFP49454 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.67■■□□□ 1.06
CENPFP49454 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CENPFP49454 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CENPFP49454 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.67■■□□□ 1.06
CENPFP49454 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.67■■□□□ 1.06
CENPFP49454 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
CENPFP49454 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.67■■□□□ 1.06
CENPFP49454 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CENPFP49454 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CENPFP49454 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CENPFP49454 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.66■■□□□ 1.06
CENPFP49454 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CENPFP49454 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CENPFP49454 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CENPFP49454 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.66■■□□□ 1.06
CENPFP49454 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CENPFP49454 CHCHD2P8-201ENST00000429873 447 ntBASIC21.66■■□□□ 1.06
CENPFP49454 AC034232.1-201ENST00000506026 1064 ntBASIC21.66■■□□□ 1.06
CENPFP49454 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CENPFP49454 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CENPFP49454 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CENPFP49454 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CENPFP49454 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CENPFP49454 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.66■■□□□ 1.06
CENPFP49454 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CENPFP49454 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CENPFP49454 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.65■■□□□ 1.06
CENPFP49454 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CENPFP49454 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CENPFP49454 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.65■■□□□ 1.06
CENPFP49454 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CENPFP49454 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.65■■□□□ 1.06
CENPFP49454 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.65■■□□□ 1.06
CENPFP49454 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CENPFP49454 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CENPFP49454 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CENPFP49454 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.65■■□□□ 1.06
CENPFP49454 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.65■■□□□ 1.06
CENPFP49454 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CENPFP49454 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.65■■□□□ 1.06
CENPFP49454 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CENPFP49454 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CENPFP49454 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CENPFP49454 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CENPFP49454 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.65■■□□□ 1.06
CENPFP49454 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CENPFP49454 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CENPFP49454 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.65■■□□□ 1.06
CENPFP49454 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.65■■□□□ 1.06
CENPFP49454 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.65■■□□□ 1.06
CENPFP49454 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.65■■□□□ 1.06
CENPFP49454 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.65■■□□□ 1.06
CENPFP49454 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CENPFP49454 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CENPFP49454 KRT8P11-201ENST00000409686 1436 ntBASIC21.65■■□□□ 1.06
CENPFP49454 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CENPFP49454 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CENPFP49454 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
CENPFP49454 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CENPFP49454 TOB2P1-201ENST00000469761 992 ntBASIC21.65■■□□□ 1.06
CENPFP49454 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.65■■□□□ 1.06
CENPFP49454 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CENPFP49454 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.65■■□□□ 1.06
CENPFP49454 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CENPFP49454 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
CENPFP49454 AC243591.1-201ENST00000452967 1364 ntBASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms