Protein–RNA interactions for Protein: P10078

Zfp28, Zinc finger protein 28, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp28P10078 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Zfp28P10078 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp28P10078 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Zfp28P10078 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp28P10078 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp28P10078 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp28P10078 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.13■□□□□ 0.01
Zfp28P10078 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.13■□□□□ 0.01
Zfp28P10078 Gm43183-201ENSMUST00000200632 547 ntBASIC15.13■□□□□ 0.01
Zfp28P10078 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.13■□□□□ 0.01
Zfp28P10078 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp28P10078 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Zfp28P10078 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp28P10078 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp28P10078 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.13■□□□□ 0.01
Zfp28P10078 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp28P10078 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp28P10078 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp28P10078 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp28P10078 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp28P10078 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp28P10078 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp28P10078 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp28P10078 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp28P10078 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.12■□□□□ 0.01
Zfp28P10078 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp28P10078 Sybu-209ENSMUST00000228639 4113 ntBASIC15.12■□□□□ 0.01
Zfp28P10078 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp28P10078 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
Zfp28P10078 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Zfp28P10078 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp28P10078 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp28P10078 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp28P10078 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp28P10078 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp28P10078 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Zfp28P10078 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp28P10078 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp28P10078 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp28P10078 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp28P10078 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp28P10078 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp28P10078 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp28P10078 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Zfp28P10078 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.12■□□□□ 0.01
Zfp28P10078 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp28P10078 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp28P10078 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp28P10078 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Zfp28P10078 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp28P10078 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp28P10078 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.12■□□□□ 0.01
Zfp28P10078 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp28P10078 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Zfp28P10078 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp28P10078 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Zfp28P10078 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp28P10078 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp28P10078 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp28P10078 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp28P10078 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp28P10078 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp28P10078 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp28P10078 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp28P10078 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp28P10078 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp28P10078 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.11■□□□□ 0.01
Zfp28P10078 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.11■□□□□ 0.01
Zfp28P10078 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp28P10078 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp28P10078 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp28P10078 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp28P10078 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Zfp28P10078 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp28P10078 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp28P10078 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp28P10078 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.1■□□□□ 0.01
Zfp28P10078 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp28P10078 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp28P10078 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp28P10078 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Zfp28P10078 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Zfp28P10078 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp28P10078 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp28P10078 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp28P10078 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp28P10078 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.1■□□□□ 0.01
Zfp28P10078 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp28P10078 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.1■□□□□ 0.01
Zfp28P10078 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.1■□□□□ 0.01
Zfp28P10078 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp28P10078 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Zfp28P10078 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp28P10078 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Zfp28P10078 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Zfp28P10078 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp28P10078 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp28P10078 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.1■□□□□ 0.01
Zfp28P10078 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp28P10078 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms