Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trove2O08848 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Trove2O08848 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trove2O08848 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trove2O08848 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.84■□□□□ 0.29
Trove2O08848 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Trove2O08848 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trove2O08848 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trove2O08848 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trove2O08848 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trove2O08848 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trove2O08848 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trove2O08848 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.84■□□□□ 0.29
Trove2O08848 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trove2O08848 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trove2O08848 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trove2O08848 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trove2O08848 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trove2O08848 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trove2O08848 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trove2O08848 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trove2O08848 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.83■□□□□ 0.28
Trove2O08848 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.83■□□□□ 0.28
Trove2O08848 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Trove2O08848 Gm10698-201ENSMUST00000182663 604 ntBASIC16.83■□□□□ 0.28
Trove2O08848 Gm8520-201ENSMUST00000186517 868 ntBASIC16.83■□□□□ 0.28
Trove2O08848 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.83■□□□□ 0.28
Trove2O08848 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.83■□□□□ 0.28
Trove2O08848 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trove2O08848 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trove2O08848 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trove2O08848 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trove2O08848 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trove2O08848 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trove2O08848 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.82■□□□□ 0.28
Trove2O08848 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trove2O08848 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trove2O08848 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trove2O08848 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trove2O08848 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trove2O08848 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trove2O08848 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trove2O08848 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.82■□□□□ 0.28
Trove2O08848 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trove2O08848 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trove2O08848 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trove2O08848 Gm10517-202ENSMUST00000192970 758 ntBASIC16.82■□□□□ 0.28
Trove2O08848 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.82■□□□□ 0.28
Trove2O08848 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Trove2O08848 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trove2O08848 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trove2O08848 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trove2O08848 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trove2O08848 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trove2O08848 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trove2O08848 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trove2O08848 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trove2O08848 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trove2O08848 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trove2O08848 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trove2O08848 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trove2O08848 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trove2O08848 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trove2O08848 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trove2O08848 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trove2O08848 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trove2O08848 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Trove2O08848 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trove2O08848 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trove2O08848 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trove2O08848 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.81■□□□□ 0.28
Trove2O08848 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trove2O08848 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trove2O08848 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.81■□□□□ 0.28
Trove2O08848 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.81■□□□□ 0.28
Trove2O08848 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trove2O08848 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trove2O08848 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trove2O08848 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trove2O08848 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trove2O08848 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trove2O08848 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Trove2O08848 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trove2O08848 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trove2O08848 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Trove2O08848 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trove2O08848 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trove2O08848 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trove2O08848 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trove2O08848 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trove2O08848 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trove2O08848 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trove2O08848 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.8■□□□□ 0.28
Trove2O08848 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trove2O08848 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trove2O08848 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trove2O08848 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.8■□□□□ 0.28
Trove2O08848 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.8■□□□□ 0.28
Trove2O08848 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trove2O08848 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms