Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
E2F3O00716 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.72■□□□□ 0.59
E2F3O00716 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.72■□□□□ 0.59
E2F3O00716 RPPH1-201ENST00000516869 333 ntBASIC18.72■□□□□ 0.59
E2F3O00716 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
E2F3O00716 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.72■□□□□ 0.59
E2F3O00716 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.72■□□□□ 0.59
E2F3O00716 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
E2F3O00716 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.72■□□□□ 0.59
E2F3O00716 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
E2F3O00716 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
E2F3O00716 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.72■□□□□ 0.59
E2F3O00716 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
E2F3O00716 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
E2F3O00716 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.72■□□□□ 0.59
E2F3O00716 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
E2F3O00716 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
E2F3O00716 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
E2F3O00716 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
E2F3O00716 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
E2F3O00716 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
E2F3O00716 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.71■□□□□ 0.59
E2F3O00716 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
E2F3O00716 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.71■□□□□ 0.59
E2F3O00716 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.71■□□□□ 0.59
E2F3O00716 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.71■□□□□ 0.59
E2F3O00716 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
E2F3O00716 IRX1P1-201ENST00000438849 1838 ntBASIC18.71■□□□□ 0.59
E2F3O00716 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
E2F3O00716 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
E2F3O00716 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
E2F3O00716 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
E2F3O00716 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
E2F3O00716 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
E2F3O00716 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.58
E2F3O00716 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
E2F3O00716 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
E2F3O00716 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.7■□□□□ 0.58
E2F3O00716 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
E2F3O00716 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.7■□□□□ 0.58
E2F3O00716 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
E2F3O00716 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
E2F3O00716 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
E2F3O00716 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
E2F3O00716 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
E2F3O00716 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
E2F3O00716 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
E2F3O00716 MIR718-201ENST00000390190 70 ntBASIC18.7■□□□□ 0.58
E2F3O00716 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
E2F3O00716 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
E2F3O00716 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
E2F3O00716 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.7■□□□□ 0.58
E2F3O00716 C1QBPP2-201ENST00000528754 825 ntBASIC18.7■□□□□ 0.58
E2F3O00716 PRKY-204ENST00000533551 1019 ntBASIC18.7■□□□□ 0.58
E2F3O00716 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.7■□□□□ 0.58
E2F3O00716 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.7■□□□□ 0.58
E2F3O00716 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
E2F3O00716 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.7■□□□□ 0.58
E2F3O00716 AC233263.1-201ENST00000578059 224 ntBASIC18.7■□□□□ 0.58
E2F3O00716 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
E2F3O00716 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.7■□□□□ 0.58
E2F3O00716 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
E2F3O00716 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
E2F3O00716 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
E2F3O00716 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
E2F3O00716 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
E2F3O00716 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.7■□□□□ 0.58
E2F3O00716 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
E2F3O00716 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
E2F3O00716 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
E2F3O00716 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
E2F3O00716 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.69■□□□□ 0.58
E2F3O00716 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
E2F3O00716 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
E2F3O00716 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
E2F3O00716 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
E2F3O00716 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.69■□□□□ 0.58
E2F3O00716 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
E2F3O00716 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
E2F3O00716 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
E2F3O00716 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
E2F3O00716 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
E2F3O00716 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.69■□□□□ 0.58
E2F3O00716 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.69■□□□□ 0.58
E2F3O00716 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
E2F3O00716 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.69■□□□□ 0.58
E2F3O00716 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
E2F3O00716 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.69■□□□□ 0.58
E2F3O00716 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.69■□□□□ 0.58
E2F3O00716 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.69■□□□□ 0.58
E2F3O00716 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.69■□□□□ 0.58
E2F3O00716 FAM197Y4-202ENST00000622692 608 ntBASIC18.69■□□□□ 0.58
E2F3O00716 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
E2F3O00716 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
E2F3O00716 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.69■□□□□ 0.58
E2F3O00716 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
E2F3O00716 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
E2F3O00716 AL138781.2-201ENST00000617896 1843 ntBASIC18.69■□□□□ 0.58
E2F3O00716 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
E2F3O00716 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms