Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 THAP12P9-201ENST00000503971 2360 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 AC007842.1-201ENST00000597336 2039 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 AC233263.6-201ENST00000631132 1963 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
GPC6Q9Y625 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GPC6Q9Y625 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
GPC6Q9Y625 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GPC6Q9Y625 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
GPC6Q9Y625 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GPC6Q9Y625 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.6□□□□□ -1.51
GPC6Q9Y625 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
GPC6Q9Y625 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
GPC6Q9Y625 AC138393.1-203ENST00000327086 343 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 SNORA20.1-201ENST00000364790 130 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 RNU4-2-201ENST00000365668 141 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GPC6Q9Y625 MIR1252-201ENST00000408861 65 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 RNA5SP156-201ENST00000410250 110 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 RNU2-21P-201ENST00000410368 188 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 AC108479.1-201ENST00000431142 427 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 AL353997.1-201ENST00000432936 108 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 AC099670.2-201ENST00000435130 321 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 HSFY6P-201ENST00000445573 403 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 FTH1P25-201ENST00000447665 469 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 AP000926.1-201ENST00000479573 241 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 HMGB3P17-201ENST00000504195 649 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 MTCO3P44-201ENST00000510977 541 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 FTH1P9-201ENST00000513251 355 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 RNU6-513P-201ENST00000516104 104 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 Y_RNA.689-201ENST00000516589 107 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 RNA5SP230-201ENST00000517039 122 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 Y_RNA.715-201ENST00000517082 110 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.6□□□□□ -1.51
GPC6Q9Y625 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.6□□□□□ -1.51
GPC6Q9Y625 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.6□□□□□ -1.51
GPC6Q9Y625 AC091516.1-201ENST00000549191 703 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.6□□□□□ -1.51
GPC6Q9Y625 MIR3154-201ENST00000577829 84 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GPC6Q9Y625 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.6□□□□□ -1.51
GPC6Q9Y625 Z98751.3-201ENST00000604447 521 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 AL359091.2-201ENST00000609303 556 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 MIR6889-201ENST00000613185 59 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 AC137590.2-201ENST00000619709 240 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 AC110801.1-201ENST00000623590 212 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
GPC6Q9Y625 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.6□□□□□ -1.51
GPC6Q9Y625 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
GPC6Q9Y625 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GPC6Q9Y625 AL161756.3-201ENST00000641216 2071 ntBASIC5.6□□□□□ -1.51
GPC6Q9Y625 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GPC6Q9Y625 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.6□□□□□ -1.51
GPC6Q9Y625 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.6□□□□□ -1.51
GPC6Q9Y625 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GPC6Q9Y625 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GPC6Q9Y625 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GPC6Q9Y625 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
GPC6Q9Y625 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GPC6Q9Y625 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.59□□□□□ -1.51
GPC6Q9Y625 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
GPC6Q9Y625 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.59□□□□□ -1.51
GPC6Q9Y625 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.59□□□□□ -1.51
GPC6Q9Y625 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GPC6Q9Y625 U3.10-201ENST00000364459 214 ntBASIC5.59□□□□□ -1.51
GPC6Q9Y625 RNU6-190P-201ENST00000384154 102 ntBASIC5.59□□□□□ -1.51
GPC6Q9Y625 RNU6-842P-201ENST00000384269 107 ntBASIC5.59□□□□□ -1.51
GPC6Q9Y625 Y_RNA.483-201ENST00000384380 101 ntBASIC5.59□□□□□ -1.51
GPC6Q9Y625 MIR517A-201ENST00000385001 87 ntBASIC5.59□□□□□ -1.51
GPC6Q9Y625 RNU4-65P-201ENST00000410473 140 ntBASIC5.59□□□□□ -1.51
GPC6Q9Y625 AC011933.1-201ENST00000413334 321 ntBASIC5.59□□□□□ -1.51
GPC6Q9Y625 AL096829.1-201ENST00000413677 457 ntBASIC5.59□□□□□ -1.51
GPC6Q9Y625 AL035422.1-201ENST00000414193 397 ntBASIC5.59□□□□□ -1.51
GPC6Q9Y625 PGBD4P6-201ENST00000421501 610 ntBASIC5.59□□□□□ -1.51
GPC6Q9Y625 RPS12P5-201ENST00000423449 371 ntBASIC5.59□□□□□ -1.51
GPC6Q9Y625 AC130360.1-201ENST00000425489 1117 ntBASIC5.59□□□□□ -1.51
GPC6Q9Y625 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.59□□□□□ -1.51
GPC6Q9Y625 AL389925.1-201ENST00000432257 728 ntBASIC5.59□□□□□ -1.51
GPC6Q9Y625 GAPDHP59-201ENST00000435908 267 ntBASIC5.59□□□□□ -1.51
GPC6Q9Y625 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.59□□□□□ -1.51
GPC6Q9Y625 SDC4P-201ENST00000453285 601 ntBASIC5.59□□□□□ -1.51
GPC6Q9Y625 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.59□□□□□ -1.51
GPC6Q9Y625 YRDCP3-201ENST00000456507 480 ntBASIC5.59□□□□□ -1.51
GPC6Q9Y625 RNU7-187P-201ENST00000458985 68 ntBASIC5.59□□□□□ -1.51
GPC6Q9Y625 ACA64.4-201ENST00000459070 127 ntBASIC5.59□□□□□ -1.51
GPC6Q9Y625 RPL12P20-201ENST00000475538 479 ntBASIC5.59□□□□□ -1.51
GPC6Q9Y625 RPL21P103-201ENST00000479921 488 ntBASIC5.59□□□□□ -1.51
GPC6Q9Y625 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.59□□□□□ -1.51
GPC6Q9Y625 AC018437.1-201ENST00000492214 406 ntBASIC5.59□□□□□ -1.51
GPC6Q9Y625 AL117692.1-201ENST00000494283 713 ntBASIC5.59□□□□□ -1.51
GPC6Q9Y625 VN1R104P-201ENST00000505115 1009 ntBASIC5.59□□□□□ -1.51
GPC6Q9Y625 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.59□□□□□ -1.51
GPC6Q9Y625 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.59□□□□□ -1.51
GPC6Q9Y625 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.59□□□□□ -1.51
GPC6Q9Y625 AC130365.2-201ENST00000525882 1201 ntBASIC5.59□□□□□ -1.51
GPC6Q9Y625 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.59□□□□□ -1.51
GPC6Q9Y625 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.59□□□□□ -1.51
GPC6Q9Y625 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.59□□□□□ -1.51
GPC6Q9Y625 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.59□□□□□ -1.51
GPC6Q9Y625 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.59□□□□□ -1.51
GPC6Q9Y625 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms