Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.14□□□□□ -2.07
AP4S1Q9Y587 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
AP4S1Q9Y587 DSTNP2-201ENST00000504533 515 ntBASIC2.14□□□□□ -2.07
AP4S1Q9Y587 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.14□□□□□ -2.07
AP4S1Q9Y587 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
AP4S1Q9Y587 MTCO2P32-201ENST00000514865 403 ntBASIC2.14□□□□□ -2.07
AP4S1Q9Y587 SNORA31.1-201ENST00000515993 133 ntBASIC2.14□□□□□ -2.07
AP4S1Q9Y587 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.14□□□□□ -2.07
AP4S1Q9Y587 SNORA31.5-201ENST00000516190 133 ntBASIC2.14□□□□□ -2.07
AP4S1Q9Y587 SNORA67.7-201ENST00000516664 135 ntBASIC2.14□□□□□ -2.07
AP4S1Q9Y587 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC2.14□□□□□ -2.07
AP4S1Q9Y587 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.14□□□□□ -2.07
AP4S1Q9Y587 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.14□□□□□ -2.07
AP4S1Q9Y587 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.14□□□□□ -2.07
AP4S1Q9Y587 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.14□□□□□ -2.07
AP4S1Q9Y587 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.14□□□□□ -2.07
AP4S1Q9Y587 AC006133.1-201ENST00000617106 264 ntBASIC2.14□□□□□ -2.07
AP4S1Q9Y587 AC139769.3-201ENST00000618383 175 ntBASIC2.14□□□□□ -2.07
AP4S1Q9Y587 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.14□□□□□ -2.07
AP4S1Q9Y587 MIR8057-201ENST00000620957 69 ntBASIC2.14□□□□□ -2.07
AP4S1Q9Y587 AC244100.1-202ENST00000621554 382 ntBASIC2.14□□□□□ -2.07
AP4S1Q9Y587 AC092159.4-201ENST00000624944 550 ntBASIC2.14□□□□□ -2.07
AP4S1Q9Y587 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.14□□□□□ -2.07
AP4S1Q9Y587 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
AP4S1Q9Y587 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
AP4S1Q9Y587 AC116096.1-201ENST00000566804 2314 ntBASIC2.13□□□□□ -2.07
AP4S1Q9Y587 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
AP4S1Q9Y587 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
AP4S1Q9Y587 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.13□□□□□ -2.07
AP4S1Q9Y587 SNORA44-201ENST00000384584 132 ntBASIC2.13□□□□□ -2.07
AP4S1Q9Y587 RPS3AP26-201ENST00000398259 784 ntBASIC2.13□□□□□ -2.07
AP4S1Q9Y587 RN7SKP140-201ENST00000411196 284 ntBASIC2.13□□□□□ -2.07
AP4S1Q9Y587 AC013404.1-201ENST00000413068 249 ntBASIC2.13□□□□□ -2.07
AP4S1Q9Y587 Z82209.1-201ENST00000422141 2135 ntBASIC2.13□□□□□ -2.07
AP4S1Q9Y587 HMGN2P38-201ENST00000423806 265 ntBASIC2.13□□□□□ -2.07
AP4S1Q9Y587 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.13□□□□□ -2.07
AP4S1Q9Y587 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.13□□□□□ -2.07
AP4S1Q9Y587 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.13□□□□□ -2.07
AP4S1Q9Y587 ARL4AP4-201ENST00000434170 518 ntBASIC2.13□□□□□ -2.07
AP4S1Q9Y587 AC105272.1-201ENST00000438604 198 ntBASIC2.13□□□□□ -2.07
AP4S1Q9Y587 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.13□□□□□ -2.07
AP4S1Q9Y587 RSL24D1P3-201ENST00000449255 495 ntBASIC2.13□□□□□ -2.07
AP4S1Q9Y587 Z99714.1-201ENST00000450463 807 ntBASIC2.13□□□□□ -2.07
AP4S1Q9Y587 RNU6-717P-201ENST00000459076 104 ntBASIC2.13□□□□□ -2.07
AP4S1Q9Y587 HMGB1P38-201ENST00000490557 577 ntBASIC2.13□□□□□ -2.07
AP4S1Q9Y587 RNU1-40P-201ENST00000516816 164 ntBASIC2.13□□□□□ -2.07
AP4S1Q9Y587 RNU1-97P-201ENST00000516872 164 ntBASIC2.13□□□□□ -2.07
AP4S1Q9Y587 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.13□□□□□ -2.07
AP4S1Q9Y587 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.13□□□□□ -2.07
AP4S1Q9Y587 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
AP4S1Q9Y587 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.13□□□□□ -2.07
AP4S1Q9Y587 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.13□□□□□ -2.07
AP4S1Q9Y587 AC092608.2-201ENST00000624427 218 ntBASIC2.13□□□□□ -2.07
AP4S1Q9Y587 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.13□□□□□ -2.07
AP4S1Q9Y587 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
AP4S1Q9Y587 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.12□□□□□ -2.07
AP4S1Q9Y587 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
AP4S1Q9Y587 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
AP4S1Q9Y587 AL596028.1-201ENST00000326971 197 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.12□□□□□ -2.07
AP4S1Q9Y587 RNA5SP138-201ENST00000365098 114 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 DEFB109C-201ENST00000382575 264 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 DEFB109B-201ENST00000382656 264 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 MIR518C-201ENST00000384822 101 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 AL591034.1-201ENST00000407447 340 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 RNU2-25P-201ENST00000411041 191 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.12□□□□□ -2.07
AP4S1Q9Y587 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.12□□□□□ -2.07
AP4S1Q9Y587 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.12□□□□□ -2.07
AP4S1Q9Y587 RPL21P66-201ENST00000426566 466 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
AP4S1Q9Y587 CKS1BP5-201ENST00000434172 273 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.12□□□□□ -2.07
AP4S1Q9Y587 AL445669.2-201ENST00000454425 421 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.12□□□□□ -2.07
AP4S1Q9Y587 RPS29P12-201ENST00000460178 152 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 AC109486.1-201ENST00000486833 374 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.12□□□□□ -2.07
AP4S1Q9Y587 AC009901.1-201ENST00000506703 541 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 AC008716.1-201ENST00000511084 513 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 RNU1-61P-201ENST00000516107 151 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.12□□□□□ -2.07
AP4S1Q9Y587 VN1R81P-201ENST00000602085 372 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 AC007619.2-201ENST00000605743 379 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 AL355816.1-201ENST00000607951 118 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 AC096586.2-201ENST00000610260 441 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 MIR6840-201ENST00000611937 71 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 AC098657.3-201ENST00000620434 263 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 AC097714.1-201ENST00000511272 1647 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 AC104446.1-201ENST00000613728 1321 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
AP4S1Q9Y587 MTCO1P8-201ENST00000416914 1523 ntBASIC2.12□□□□□ -2.07
AP4S1Q9Y587 MTND5P1-201ENST00000445440 1375 ntBASIC2.11□□□□□ -2.07
AP4S1Q9Y587 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.11□□□□□ -2.07
AP4S1Q9Y587 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.11□□□□□ -2.07
AP4S1Q9Y587 RNU6-1180P-201ENST00000364935 107 ntBASIC2.11□□□□□ -2.07
AP4S1Q9Y587 MIR34B-201ENST00000385076 84 ntBASIC2.11□□□□□ -2.07
AP4S1Q9Y587 ATP5F1P3-201ENST00000397213 657 ntBASIC2.11□□□□□ -2.07
AP4S1Q9Y587 RN7SKP27-201ENST00000410684 333 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms