Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.3□□□□□ -1.72
HDAC6Q9UBN7 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.3□□□□□ -1.72
HDAC6Q9UBN7 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.3□□□□□ -1.72
HDAC6Q9UBN7 AC005178.1-201ENST00000508392 440 ntBASIC4.3□□□□□ -1.72
HDAC6Q9UBN7 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
HDAC6Q9UBN7 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.3□□□□□ -1.72
HDAC6Q9UBN7 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.3□□□□□ -1.72
HDAC6Q9UBN7 RNY4P37-201ENST00000516225 96 ntBASIC4.3□□□□□ -1.72
HDAC6Q9UBN7 DUXAP2-201ENST00000519198 589 ntBASIC4.3□□□□□ -1.72
HDAC6Q9UBN7 AC087373.1-201ENST00000524920 491 ntBASIC4.3□□□□□ -1.72
HDAC6Q9UBN7 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.3□□□□□ -1.72
HDAC6Q9UBN7 AL161713.1-201ENST00000555538 145 ntBASIC4.3□□□□□ -1.72
HDAC6Q9UBN7 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.3□□□□□ -1.72
HDAC6Q9UBN7 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.3□□□□□ -1.72
HDAC6Q9UBN7 AC007566.2-201ENST00000603642 413 ntBASIC4.3□□□□□ -1.72
HDAC6Q9UBN7 AC115621.1-201ENST00000604653 858 ntBASIC4.3□□□□□ -1.72
HDAC6Q9UBN7 AC018714.1-201ENST00000605028 208 ntBASIC4.3□□□□□ -1.72
HDAC6Q9UBN7 AC008083.4-201ENST00000615076 444 ntBASIC4.3□□□□□ -1.72
HDAC6Q9UBN7 AL357559.1-201ENST00000622228 274 ntBASIC4.3□□□□□ -1.72
HDAC6Q9UBN7 C2orf27A-204ENST00000623058 969 ntBASIC4.3□□□□□ -1.72
HDAC6Q9UBN7 AF246928.1-201ENST00000623768 87 ntBASIC4.3□□□□□ -1.72
HDAC6Q9UBN7 AC231657.1-201ENST00000624313 397 ntBASIC4.3□□□□□ -1.72
HDAC6Q9UBN7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.3□□□□□ -1.72
HDAC6Q9UBN7 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 U3.15-201ENST00000365398 212 ntBASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 RNU6-657P-201ENST00000383904 107 ntBASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 RNU6-1226P-201ENST00000384317 107 ntBASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 SNRPEP2-201ENST00000397592 279 ntBASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 HMGB1P17-201ENST00000403495 628 ntBASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 BTBD10P2-201ENST00000404779 676 ntBASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AC019178.2-201ENST00000423595 505 ntBASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 HMGN2P31-201ENST00000432430 273 ntBASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AC096638.2-201ENST00000434965 711 ntBASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 RPL23AP74-201ENST00000437246 471 ntBASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AC097493.1-201ENST00000463958 372 ntBASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 NIPA2P2-201ENST00000496376 1083 ntBASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AC022695.1-201ENST00000522089 237 ntBASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 DEFB131D-201ENST00000526803 184 ntBASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 OR4A45P-201ENST00000529954 901 ntBASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 HSPE1P3-201ENST00000559254 309 ntBASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AC010620.1-201ENST00000601088 1102 ntBASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AL590229.1-201ENST00000603497 542 ntBASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AC080013.6-201ENST00000606185 215 ntBASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AC080013.4-201ENST00000607624 649 ntBASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AC084757.4-201ENST00000616350 526 ntBASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AC009090.3-201ENST00000616553 565 ntBASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AL031667.3-201ENST00000620124 655 ntBASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 OR4G11P-202ENST00000642116 1414 ntBASIC4.29□□□□□ -1.72
HDAC6Q9UBN7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 NCAPGP1-201ENST00000505112 1814 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 AL513185.3-201ENST00000433335 1300 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 SNORA51.6-201ENST00000384151 125 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 AL031577.2-201ENST00000404133 280 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 AL024474.1-201ENST00000404655 591 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 MIR1302-8-201ENST00000408342 128 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 PIGPP2-201ENST00000411569 458 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 AL049610.1-201ENST00000423374 372 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 UBE2FP3-201ENST00000436366 524 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 TRGVB-201ENST00000453257 471 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 RPL31P3-201ENST00000458430 332 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 AC072039.1-201ENST00000477611 581 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 RPL7P24-201ENST00000493052 752 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms