Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AL603839.4-201ENST00000624658 1005 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRFN1Q9P244 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRFN1Q9P244 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.14□□□□□ -1.75
LRFN1Q9P244 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.14□□□□□ -1.75
LRFN1Q9P244 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
LRFN1Q9P244 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 TAB3P1-202ENST00000452645 1634 ntBASIC4.13□□□□□ -1.75
LRFN1Q9P244 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
LRFN1Q9P244 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
LRFN1Q9P244 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.13□□□□□ -1.75
LRFN1Q9P244 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LRFN1Q9P244 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
LRFN1Q9P244 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.13□□□□□ -1.75
LRFN1Q9P244 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
LRFN1Q9P244 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
LRFN1Q9P244 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.13□□□□□ -1.75
LRFN1Q9P244 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
LRFN1Q9P244 Y_RNA.553-201ENST00000384670 102 ntBASIC4.13□□□□□ -1.75
LRFN1Q9P244 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.13□□□□□ -1.75
LRFN1Q9P244 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LRFN1Q9P244 RPL21P32-201ENST00000419877 477 ntBASIC4.13□□□□□ -1.75
LRFN1Q9P244 AL353777.1-201ENST00000425552 326 ntBASIC4.13□□□□□ -1.75
LRFN1Q9P244 RPL21P66-201ENST00000426566 466 ntBASIC4.13□□□□□ -1.75
LRFN1Q9P244 RPS29P17-201ENST00000430795 166 ntBASIC4.13□□□□□ -1.75
LRFN1Q9P244 OR4K11P-201ENST00000431829 904 ntBASIC4.13□□□□□ -1.75
LRFN1Q9P244 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.13□□□□□ -1.75
LRFN1Q9P244 AC092641.1-201ENST00000440229 772 ntBASIC4.13□□□□□ -1.75
LRFN1Q9P244 PHBP16-201ENST00000446318 950 ntBASIC4.13□□□□□ -1.75
LRFN1Q9P244 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.13□□□□□ -1.75
LRFN1Q9P244 snoU13.4-201ENST00000458916 104 ntBASIC4.13□□□□□ -1.75
LRFN1Q9P244 RN7SL303P-201ENST00000469773 251 ntBASIC4.13□□□□□ -1.75
LRFN1Q9P244 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.13□□□□□ -1.75
LRFN1Q9P244 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.13□□□□□ -1.75
LRFN1Q9P244 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.13□□□□□ -1.75
LRFN1Q9P244 AC055855.1-201ENST00000489563 579 ntBASIC4.13□□□□□ -1.75
LRFN1Q9P244 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.13□□□□□ -1.75
LRFN1Q9P244 NPM1P41-201ENST00000512920 831 ntBASIC4.13□□□□□ -1.75
LRFN1Q9P244 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.13□□□□□ -1.75
LRFN1Q9P244 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.13□□□□□ -1.75
LRFN1Q9P244 AP000873.5-201ENST00000533906 236 ntBASIC4.13□□□□□ -1.75
LRFN1Q9P244 MIR3160-1-201ENST00000577972 85 ntBASIC4.13□□□□□ -1.75
LRFN1Q9P244 AL359999.1-201ENST00000604513 294 ntBASIC4.13□□□□□ -1.75
LRFN1Q9P244 AL022099.1-201ENST00000604551 712 ntBASIC4.13□□□□□ -1.75
LRFN1Q9P244 AC087752.4-201ENST00000605911 462 ntBASIC4.13□□□□□ -1.75
LRFN1Q9P244 AC012557.2-201ENST00000605919 418 ntBASIC4.13□□□□□ -1.75
LRFN1Q9P244 AC020634.1-201ENST00000608701 549 ntBASIC4.13□□□□□ -1.75
LRFN1Q9P244 AL355472.4-201ENST00000610233 626 ntBASIC4.13□□□□□ -1.75
LRFN1Q9P244 AC009159.1-201ENST00000618386 642 ntBASIC4.13□□□□□ -1.75
LRFN1Q9P244 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.13□□□□□ -1.75
LRFN1Q9P244 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LRFN1Q9P244 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.13□□□□□ -1.75
LRFN1Q9P244 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.13□□□□□ -1.75
LRFN1Q9P244 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LRFN1Q9P244 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
LRFN1Q9P244 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LRFN1Q9P244 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
LRFN1Q9P244 AP001486.2-201ENST00000561652 5113 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 CPHL1P-201ENST00000461341 3407 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LRFN1Q9P244 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
LRFN1Q9P244 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
LRFN1Q9P244 AL138713.1-201ENST00000624026 2130 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 RNU6-600P-201ENST00000362524 99 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 RNU6-637P-201ENST00000384050 107 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 RNU6-754P-201ENST00000391166 107 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 SNORA57.1-201ENST00000391227 145 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 Y_RNA.598-201ENST00000410480 95 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 RNA5SP146-201ENST00000410743 123 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 RN7SKP263-201ENST00000411194 309 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 AC011933.1-201ENST00000413334 321 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 BTF3L4P1-201ENST00000413813 468 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 ZNF885P-201ENST00000420174 1098 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 AC004866.2-201ENST00000438285 481 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 RAC1P7-201ENST00000445367 377 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 RPL23AP43-201ENST00000446445 471 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 AC012671.1-201ENST00000451912 203 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 DNAJC19P1-201ENST00000455312 319 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 RNU6-956P-201ENST00000458868 103 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 AC116533.1-201ENST00000459748 321 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 RPL7P24-201ENST00000493052 752 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 RPL23AP55-201ENST00000498163 452 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 MTND4P2-201ENST00000507767 1203 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 PAICSP4-201ENST00000517543 1253 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 RPL12P22-201ENST00000519073 490 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms