Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC010632.3-201ENST00000611377 369 ntBASIC5.71□□□□□ -1.5
CNTN3Q9P232 RPSAP73-201ENST00000614820 330 ntBASIC5.71□□□□□ -1.5
CNTN3Q9P232 AC133104.2-201ENST00000615272 193 ntBASIC5.71□□□□□ -1.5
CNTN3Q9P232 AL590099.1-201ENST00000615276 138 ntBASIC5.71□□□□□ -1.5
CNTN3Q9P232 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CNTN3Q9P232 AC011155.2-201ENST00000623202 216 ntBASIC5.71□□□□□ -1.5
CNTN3Q9P232 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.71□□□□□ -1.5
CNTN3Q9P232 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTN3Q9P232 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CNTN3Q9P232 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTN3Q9P232 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTN3Q9P232 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CNTN3Q9P232 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTN3Q9P232 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTN3Q9P232 SAGE2P-201ENST00000420011 2126 ntBASIC5.71□□□□□ -1.5
CNTN3Q9P232 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.71□□□□□ -1.5
CNTN3Q9P232 Z95327.2-201ENST00000414579 1873 ntBASIC5.71□□□□□ -1.5
CNTN3Q9P232 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.7□□□□□ -1.5
CNTN3Q9P232 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTN3Q9P232 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.7□□□□□ -1.5
CNTN3Q9P232 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTN3Q9P232 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTN3Q9P232 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CNTN3Q9P232 Y_RNA.167-201ENST00000363735 109 ntBASIC5.7□□□□□ -1.5
CNTN3Q9P232 SNORA58B-201ENST00000364259 136 ntBASIC5.7□□□□□ -1.5
CNTN3Q9P232 RNU6-907P-201ENST00000390924 102 ntBASIC5.7□□□□□ -1.5
CNTN3Q9P232 RN7SKP213-201ENST00000410746 298 ntBASIC5.7□□□□□ -1.5
CNTN3Q9P232 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.7□□□□□ -1.5
CNTN3Q9P232 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.7□□□□□ -1.5
CNTN3Q9P232 HMGB3P11-201ENST00000440127 604 ntBASIC5.7□□□□□ -1.5
CNTN3Q9P232 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.7□□□□□ -1.5
CNTN3Q9P232 AC009127.1-201ENST00000467090 155 ntBASIC5.7□□□□□ -1.5
CNTN3Q9P232 AC006967.1-201ENST00000467608 589 ntBASIC5.7□□□□□ -1.5
CNTN3Q9P232 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.7□□□□□ -1.5
CNTN3Q9P232 RPS24P16-201ENST00000497294 392 ntBASIC5.7□□□□□ -1.5
CNTN3Q9P232 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.7□□□□□ -1.5
CNTN3Q9P232 MTCYBP40-201ENST00000509390 1135 ntBASIC5.7□□□□□ -1.5
CNTN3Q9P232 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.7□□□□□ -1.5
CNTN3Q9P232 HMGN1P9-201ENST00000515212 298 ntBASIC5.7□□□□□ -1.5
CNTN3Q9P232 AC009902.1-201ENST00000519351 183 ntBASIC5.7□□□□□ -1.5
CNTN3Q9P232 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.7□□□□□ -1.5
CNTN3Q9P232 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.7□□□□□ -1.5
CNTN3Q9P232 AP000763.2-201ENST00000540641 163 ntBASIC5.7□□□□□ -1.5
CNTN3Q9P232 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.7□□□□□ -1.5
CNTN3Q9P232 AL117187.1-201ENST00000555482 181 ntBASIC5.7□□□□□ -1.5
CNTN3Q9P232 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.7□□□□□ -1.5
CNTN3Q9P232 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.7□□□□□ -1.5
CNTN3Q9P232 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.7□□□□□ -1.5
CNTN3Q9P232 MIR4790-201ENST00000577799 79 ntBASIC5.7□□□□□ -1.5
CNTN3Q9P232 MIR3691-201ENST00000578066 90 ntBASIC5.7□□□□□ -1.5
CNTN3Q9P232 MIR7853-201ENST00000584820 132 ntBASIC5.7□□□□□ -1.5
CNTN3Q9P232 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.7□□□□□ -1.5
CNTN3Q9P232 AC006116.3-201ENST00000592968 361 ntBASIC5.7□□□□□ -1.5
CNTN3Q9P232 Z82243.1-201ENST00000609432 473 ntBASIC5.7□□□□□ -1.5
CNTN3Q9P232 AC087588.2-201ENST00000617667 426 ntBASIC5.7□□□□□ -1.5
CNTN3Q9P232 RMST_9.1-201ENST00000619945 193 ntBASIC5.7□□□□□ -1.5
CNTN3Q9P232 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
CNTN3Q9P232 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTN3Q9P232 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CNTN3Q9P232 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CNTN3Q9P232 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CNTN3Q9P232 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CNTN3Q9P232 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTN3Q9P232 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
CNTN3Q9P232 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTN3Q9P232 AC004656.1-201ENST00000568479 4951 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNTN3Q9P232 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNTN3Q9P232 AL360270.2-201ENST00000562952 5985 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CNTN3Q9P232 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.69□□□□□ -1.5
CNTN3Q9P232 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNTN3Q9P232 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.69□□□□□ -1.5
CNTN3Q9P232 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNTN3Q9P232 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.69□□□□□ -1.5
CNTN3Q9P232 SNORA70.6-201ENST00000383934 134 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 Y_RNA.482-201ENST00000384377 111 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 RNU6-1106P-201ENST00000390845 107 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 SNORA68.2-201ENST00000391263 128 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 AL136372.1-201ENST00000403060 228 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 RN7SKP126-201ENST00000411143 300 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 AL591848.1-201ENST00000413092 322 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 EI24P4-201ENST00000423683 1078 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.69□□□□□ -1.5
CNTN3Q9P232 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.69□□□□□ -1.5
CNTN3Q9P232 TXNP1-201ENST00000441872 371 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.69□□□□□ -1.5
CNTN3Q9P232 RPSAP50-201ENST00000481955 852 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.69□□□□□ -1.5
CNTN3Q9P232 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.69□□□□□ -1.5
CNTN3Q9P232 AC017037.2-201ENST00000513850 890 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.69□□□□□ -1.5
CNTN3Q9P232 RNU6-1038P-201ENST00000516516 104 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 RNU6-273P-201ENST00000516937 96 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 RNA5SP454-201ENST00000517231 127 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.69□□□□□ -1.5
CNTN3Q9P232 AC090136.1-201ENST00000520009 240 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.69□□□□□ -1.5
CNTN3Q9P232 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.69□□□□□ -1.5
CNTN3Q9P232 AC109635.4-202ENST00000531666 412 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms