Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC88CQ9P219 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.41□□□□□ -2.02
CCDC88CQ9P219 AL157827.1-201ENST00000447622 132 ntBASIC2.41□□□□□ -2.02
CCDC88CQ9P219 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC88CQ9P219 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC88CQ9P219 AC025857.1-201ENST00000525252 377 ntBASIC2.41□□□□□ -2.02
CCDC88CQ9P219 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.41□□□□□ -2.02
CCDC88CQ9P219 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC88CQ9P219 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC88CQ9P219 MTCO2P22-201ENST00000603246 681 ntBASIC2.41□□□□□ -2.02
CCDC88CQ9P219 AC090525.3-201ENST00000605601 189 ntBASIC2.41□□□□□ -2.02
CCDC88CQ9P219 CRYM-AS1-204ENST00000637983 556 ntBASIC2.41□□□□□ -2.02
CCDC88CQ9P219 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC88CQ9P219 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC88CQ9P219 AL021368.2-201ENST00000606125 5352 ntBASIC2.41□□□□□ -2.02
CCDC88CQ9P219 MIR153-1-201ENST00000384914 90 ntBASIC2.41□□□□□ -2.02
CCDC88CQ9P219 PRELID3BP11-201ENST00000414230 479 ntBASIC2.41□□□□□ -2.02
CCDC88CQ9P219 NANOGP5-201ENST00000424456 877 ntBASIC2.41□□□□□ -2.02
CCDC88CQ9P219 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC88CQ9P219 AL031663.1-201ENST00000437445 219 ntBASIC2.41□□□□□ -2.02
CCDC88CQ9P219 RPL23AP33-201ENST00000442301 452 ntBASIC2.41□□□□□ -2.02
CCDC88CQ9P219 AC023512.1-201ENST00000444513 499 ntBASIC2.41□□□□□ -2.02
CCDC88CQ9P219 RPS15AP1-201ENST00000457423 391 ntBASIC2.41□□□□□ -2.02
CCDC88CQ9P219 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC88CQ9P219 AC117525.1-201ENST00000515228 503 ntBASIC2.41□□□□□ -2.02
CCDC88CQ9P219 RNU4-60P-201ENST00000517239 135 ntBASIC2.41□□□□□ -2.02
CCDC88CQ9P219 OR7K1P-201ENST00000546439 926 ntBASIC2.41□□□□□ -2.02
CCDC88CQ9P219 AC091544.4-201ENST00000555268 342 ntBASIC2.41□□□□□ -2.02
CCDC88CQ9P219 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC88CQ9P219 AC106734.1-201ENST00000568646 663 ntBASIC2.41□□□□□ -2.02
CCDC88CQ9P219 AC115989.2-201ENST00000578640 563 ntBASIC2.41□□□□□ -2.02
CCDC88CQ9P219 MIR4513-201ENST00000581077 86 ntBASIC2.41□□□□□ -2.02
CCDC88CQ9P219 AC055764.2-201ENST00000610089 670 ntBASIC2.41□□□□□ -2.02
CCDC88CQ9P219 AC010338.1-201ENST00000621823 717 ntBASIC2.41□□□□□ -2.02
CCDC88CQ9P219 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
CCDC88CQ9P219 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC88CQ9P219 RNU6-386P-201ENST00000362650 107 ntBASIC2.4□□□□□ -2.03
CCDC88CQ9P219 RNU1-100P-201ENST00000365255 165 ntBASIC2.4□□□□□ -2.03
CCDC88CQ9P219 DPH3P2-201ENST00000422618 250 ntBASIC2.4□□□□□ -2.03
CCDC88CQ9P219 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.4□□□□□ -2.03
CCDC88CQ9P219 DPPA2P1-201ENST00000428060 556 ntBASIC2.4□□□□□ -2.03
CCDC88CQ9P219 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC88CQ9P219 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC88CQ9P219 MED6P1-201ENST00000439659 713 ntBASIC2.4□□□□□ -2.03
CCDC88CQ9P219 AL513328.1-201ENST00000446460 224 ntBASIC2.4□□□□□ -2.03
CCDC88CQ9P219 RPL23AP15-201ENST00000450202 459 ntBASIC2.4□□□□□ -2.03
CCDC88CQ9P219 NPM1P13-201ENST00000452663 865 ntBASIC2.4□□□□□ -2.03
CCDC88CQ9P219 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.4□□□□□ -2.03
CCDC88CQ9P219 ANXA2P1-201ENST00000505539 926 ntBASIC2.4□□□□□ -2.03
CCDC88CQ9P219 AC021146.7-201ENST00000509604 775 ntBASIC2.4□□□□□ -2.03
CCDC88CQ9P219 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC88CQ9P219 AC010198.2-201ENST00000550612 259 ntBASIC2.4□□□□□ -2.03
CCDC88CQ9P219 CENPUP2-201ENST00000555897 1186 ntBASIC2.4□□□□□ -2.03
CCDC88CQ9P219 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC88CQ9P219 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC88CQ9P219 AL137847.3-201ENST00000611521 109 ntBASIC2.4□□□□□ -2.03
CCDC88CQ9P219 AC010297.1-201ENST00000623948 149 ntBASIC2.4□□□□□ -2.03
CCDC88CQ9P219 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 MIR6073-201ENST00000352083 89 ntBASIC2.39□□□□□ -2.03
CCDC88CQ9P219 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 Z93242.1-201ENST00000427102 353 ntBASIC2.39□□□□□ -2.03
CCDC88CQ9P219 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 CR769767.1-201ENST00000436337 346 ntBASIC2.39□□□□□ -2.03
CCDC88CQ9P219 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 OR5H4P-201ENST00000510851 923 ntBASIC2.39□□□□□ -2.03
CCDC88CQ9P219 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 LLPHP1-201ENST00000603571 367 ntBASIC2.39□□□□□ -2.03
CCDC88CQ9P219 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 DEFA7P-201ENST00000382676 285 ntBASIC2.39□□□□□ -2.03
CCDC88CQ9P219 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 RPL21P103-201ENST00000479921 488 ntBASIC2.39□□□□□ -2.03
CCDC88CQ9P219 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 PCNAP1-201ENST00000505363 709 ntBASIC2.39□□□□□ -2.03
CCDC88CQ9P219 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 MIR3670-2-201ENST00000582974 65 ntBASIC2.39□□□□□ -2.03
CCDC88CQ9P219 MIR3670-1-201ENST00000584160 65 ntBASIC2.39□□□□□ -2.03
CCDC88CQ9P219 MIR3670-3-201ENST00000584855 65 ntBASIC2.39□□□□□ -2.03
CCDC88CQ9P219 AC061975.8-201ENST00000587058 721 ntBASIC2.39□□□□□ -2.03
CCDC88CQ9P219 MIR3670-4-201ENST00000612260 65 ntBASIC2.39□□□□□ -2.03
CCDC88CQ9P219 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC88CQ9P219 AC009501.3-201ENST00000605001 1352 ntBASIC2.38□□□□□ -2.03
CCDC88CQ9P219 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC88CQ9P219 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC88CQ9P219 AL355578.1-201ENST00000607405 1328 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms