Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.73□□□□□ -1.65
DDX56Q9NY93 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.73□□□□□ -1.65
DDX56Q9NY93 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.73□□□□□ -1.65
DDX56Q9NY93 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
DDX56Q9NY93 AL590240.1-201ENST00000334118 313 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 RNU1-94P-201ENST00000362627 173 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 RNA5SP22-201ENST00000365393 109 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 RNU1-44P-201ENST00000384453 163 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
DDX56Q9NY93 ELOCP17-201ENST00000414751 326 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 CDK8P2-201ENST00000415020 547 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 UBE2FP1-201ENST00000416536 447 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 RPL27AP8-201ENST00000424277 446 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 TIMM9P1-201ENST00000436122 256 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 AC093156.1-201ENST00000440382 670 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 RABEPKP1-201ENST00000440529 1026 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 PGBD4P3-201ENST00000440731 581 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 MTND6P13-201ENST00000443510 523 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.73□□□□□ -1.65
DDX56Q9NY93 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.73□□□□□ -1.65
DDX56Q9NY93 RPL36AP13-201ENST00000457490 317 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.73□□□□□ -1.65
DDX56Q9NY93 AC018638.3-201ENST00000461273 132 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 RN7SL329P-201ENST00000467740 299 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
DDX56Q9NY93 IGLV2-34-201ENST00000490007 283 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 AC008897.1-201ENST00000494006 347 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
DDX56Q9NY93 NDUFB4P2-201ENST00000509515 391 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 FTH1P21-201ENST00000512179 511 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
DDX56Q9NY93 Y_RNA.655-201ENST00000515919 96 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 AP001922.4-201ENST00000526967 290 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 AP002963.1-201ENST00000530590 184 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 RFPL1S-203ENST00000539579 330 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.73□□□□□ -1.65
DDX56Q9NY93 AL352979.3-201ENST00000553515 247 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.73□□□□□ -1.65
DDX56Q9NY93 NRBF2P1-201ENST00000587407 859 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.73□□□□□ -1.65
DDX56Q9NY93 AC146944.4-201ENST00000602697 718 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.73□□□□□ -1.65
DDX56Q9NY93 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
DDX56Q9NY93 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.73□□□□□ -1.65
DDX56Q9NY93 AC138932.5-201ENST00000617759 563 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.73□□□□□ -1.65
DDX56Q9NY93 AC095031.1-201ENST00000623685 672 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 AC099654.13-201ENST00000639774 207 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
DDX56Q9NY93 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
DDX56Q9NY93 AC131971.1-201ENST00000332881 1482 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 LINC00622-201ENST00000562811 1570 ntBASIC4.73□□□□□ -1.65
DDX56Q9NY93 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.73□□□□□ -1.65
DDX56Q9NY93 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
DDX56Q9NY93 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.73□□□□□ -1.65
DDX56Q9NY93 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
DDX56Q9NY93 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
DDX56Q9NY93 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
DDX56Q9NY93 AC092104.1-201ENST00000497346 1441 ntBASIC4.72□□□□□ -1.65
DDX56Q9NY93 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.72□□□□□ -1.65
DDX56Q9NY93 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
DDX56Q9NY93 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
DDX56Q9NY93 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
DDX56Q9NY93 AL133383.2-201ENST00000622958 2336 ntBASIC4.72□□□□□ -1.65
DDX56Q9NY93 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.72□□□□□ -1.65
DDX56Q9NY93 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
DDX56Q9NY93 CPHL1P-201ENST00000461341 3407 ntBASIC4.72□□□□□ -1.65
DDX56Q9NY93 AC067945.1-201ENST00000342609 618 ntBASIC4.72□□□□□ -1.65
DDX56Q9NY93 Y_RNA.194-201ENST00000363985 102 ntBASIC4.72□□□□□ -1.65
DDX56Q9NY93 RNU6-1042P-201ENST00000384204 107 ntBASIC4.72□□□□□ -1.65
DDX56Q9NY93 MIR1290-201ENST00000408735 78 ntBASIC4.72□□□□□ -1.65
DDX56Q9NY93 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.72□□□□□ -1.65
DDX56Q9NY93 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.72□□□□□ -1.65
DDX56Q9NY93 EIF1P3-201ENST00000423841 334 ntBASIC4.72□□□□□ -1.65
DDX56Q9NY93 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.72□□□□□ -1.65
DDX56Q9NY93 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.72□□□□□ -1.65
DDX56Q9NY93 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.72□□□□□ -1.65
DDX56Q9NY93 AC119618.1-201ENST00000434191 222 ntBASIC4.72□□□□□ -1.65
DDX56Q9NY93 AC073614.1-201ENST00000438690 650 ntBASIC4.72□□□□□ -1.65
DDX56Q9NY93 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.72□□□□□ -1.65
DDX56Q9NY93 AL162389.1-201ENST00000449233 177 ntBASIC4.72□□□□□ -1.65
DDX56Q9NY93 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.72□□□□□ -1.65
DDX56Q9NY93 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
DDX56Q9NY93 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
DDX56Q9NY93 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.72□□□□□ -1.65
DDX56Q9NY93 RPS3AP41-201ENST00000462701 778 ntBASIC4.72□□□□□ -1.65
DDX56Q9NY93 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.72□□□□□ -1.65
DDX56Q9NY93 RPL32P9-201ENST00000487963 407 ntBASIC4.72□□□□□ -1.65
DDX56Q9NY93 RPS15AP36-201ENST00000492022 382 ntBASIC4.72□□□□□ -1.65
DDX56Q9NY93 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.72□□□□□ -1.65
DDX56Q9NY93 STMN1P2-201ENST00000508435 439 ntBASIC4.72□□□□□ -1.65
DDX56Q9NY93 AC079140.3-201ENST00000511111 550 ntBASIC4.72□□□□□ -1.65
DDX56Q9NY93 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.72□□□□□ -1.65
DDX56Q9NY93 RNU6-840P-201ENST00000517275 65 ntBASIC4.72□□□□□ -1.65
DDX56Q9NY93 IGKV1-32-201ENST00000519290 311 ntBASIC4.72□□□□□ -1.65
DDX56Q9NY93 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.72□□□□□ -1.65
DDX56Q9NY93 TOMM20P2-201ENST00000540082 421 ntBASIC4.72□□□□□ -1.65
DDX56Q9NY93 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.72□□□□□ -1.65
DDX56Q9NY93 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.72□□□□□ -1.65
DDX56Q9NY93 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms