Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC012182.1-201ENST00000570133 895 ntBASIC3.89□□□□□ -1.79
LIN7CQ9NUP9 EIF1P4-201ENST00000572664 335 ntBASIC3.89□□□□□ -1.79
LIN7CQ9NUP9 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.89□□□□□ -1.79
LIN7CQ9NUP9 AC020910.3-201ENST00000603701 874 ntBASIC3.89□□□□□ -1.79
LIN7CQ9NUP9 AL021997.1-201ENST00000605757 193 ntBASIC3.89□□□□□ -1.79
LIN7CQ9NUP9 AC068880.5-201ENST00000624331 290 ntBASIC3.89□□□□□ -1.79
LIN7CQ9NUP9 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
LIN7CQ9NUP9 AC006971.1-201ENST00000407916 4486 ntBASIC3.89□□□□□ -1.79
LIN7CQ9NUP9 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LIN7CQ9NUP9 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
LIN7CQ9NUP9 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LIN7CQ9NUP9 AL672167.1-203ENST00000641299 2975 ntBASIC3.89□□□□□ -1.79
LIN7CQ9NUP9 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LIN7CQ9NUP9 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.89□□□□□ -1.79
LIN7CQ9NUP9 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LIN7CQ9NUP9 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
LIN7CQ9NUP9 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AC007390.2-201ENST00000606229 3803 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 RNU5E-8P-201ENST00000363502 116 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 RN7SKP44-201ENST00000363602 316 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 SNORA58B-201ENST00000364259 136 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 SNORA7.2-201ENST00000364446 145 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 RNA5SP167-201ENST00000365461 116 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 MIR550A3-201ENST00000390735 95 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 RNU6-278P-201ENST00000390945 109 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 MTCO1P39-201ENST00000426148 480 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 RPL31P35-201ENST00000431058 377 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 RPL21P112-201ENST00000434403 463 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 RPS3AP17-201ENST00000472594 777 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 RBM43P1-201ENST00000476891 1081 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 RN7SL826P-201ENST00000479724 288 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 RN7SL817P-201ENST00000480777 288 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AC012158.1-204ENST00000483430 465 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AC093270.2-201ENST00000486157 792 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AC114967.1-201ENST00000504890 259 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 MLLT10P2-201ENST00000506434 249 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AC004062.1-201ENST00000509926 645 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AC022483.1-201ENST00000514020 567 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AC015912.2-201ENST00000571053 181 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 FAM60BP-201ENST00000578364 658 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 MIR3934-201ENST00000579806 107 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AC007448.1-201ENST00000582714 234 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AC245014.2-201ENST00000603689 287 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AC087283.1-201ENST00000604029 1074 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AC246785.4-201ENST00000605374 287 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AC008966.2-201ENST00000606157 453 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AL161734.1-201ENST00000609720 557 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AL590282.1-201ENST00000610379 1136 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AC093838.1-201ENST00000613014 469 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 uc_338.12-201ENST00000616344 181 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 LINC00901.1-201ENST00000617252 152 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AC006338.1-201ENST00000618453 749 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AL022401.1-201ENST00000619498 108 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AC138649.3-201ENST00000622154 254 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 AP001350.1-201ENST00000601906 1524 ntBASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LIN7CQ9NUP9 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 SDAD1P1-202ENST00000524156 2051 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 OR5J1P-201ENST00000313544 939 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 RN7SKP226-201ENST00000364912 300 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 RNU4-65P-201ENST00000410473 140 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 RNA5SP146-201ENST00000410743 123 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 Y_RNA.619-201ENST00000410951 90 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 ELOCP17-201ENST00000414751 326 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 UBE2FP1-201ENST00000416536 447 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms