Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 AC106785.1-201ENST00000565935 262 ntBASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 AC099489.2-201ENST00000574976 260 ntBASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 KLKP1-201ENST00000595979 403 ntBASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 BBIP1P1-201ENST00000602999 279 ntBASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 AC112220.3-201ENST00000605502 502 ntBASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 AL390208.1-201ENST00000605885 644 ntBASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 AP000553.6-201ENST00000641242 118 ntBASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 AC073073.2-201ENST00000609827 2578 ntBASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 AC002546.1-201ENST00000588041 2504 ntBASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 PRO1804-201ENST00000623780 2050 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 RNA5SP51-201ENST00000364750 119 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 RNU6-283P-201ENST00000364788 107 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 AP000567.1-201ENST00000406413 156 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 MTHFD2P2-201ENST00000407725 247 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 CCDC58P2-201ENST00000417131 366 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 AC245054.1-201ENST00000420944 258 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 AL445584.1-201ENST00000431451 330 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 Z80107.1-201ENST00000436830 412 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 NOTCH2P1-201ENST00000443481 624 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 NECAP1P2-201ENST00000455668 727 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 ANKRD26P4-201ENST00000455755 950 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 UBE2CP3-201ENST00000502715 450 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 AC034244.1-201ENST00000507687 207 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 RNU6-150P-201ENST00000516237 95 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 NARSP2-201ENST00000518524 679 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 SYF2P1-201ENST00000550658 413 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 AL121576.1-201ENST00000556055 276 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 AGGF1P5-201ENST00000567900 919 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 AC061975.8-201ENST00000587058 721 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 AL391001.1-201ENST00000602747 715 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 AL158042.1-201ENST00000605338 460 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 AC103710.3-201ENST00000608157 948 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 AP000484.1-201ENST00000620067 1252 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 AL353748.2-201ENST00000622148 471 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 AC119674.1-207ENST00000641355 633 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 MTND4P34-201ENST00000572715 1371 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 OTUD4P1-201ENST00000237841 3067 ntBASIC4.09□□□□□ -1.75
BLOC1S4Q9NUP1 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
BLOC1S4Q9NUP1 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
BLOC1S4Q9NUP1 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.09□□□□□ -1.76
BLOC1S4Q9NUP1 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 AL161781.1-201ENST00000354277 403 ntBASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 RNA5SP124-201ENST00000362739 110 ntBASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 RNA5SP42-201ENST00000364278 115 ntBASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 AL391417.1-201ENST00000404100 426 ntBASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 RNU2-47P-201ENST00000410649 186 ntBASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 RPL21P32-201ENST00000419877 477 ntBASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 MTCO1P39-201ENST00000426148 480 ntBASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 HMGB3P5-201ENST00000428894 612 ntBASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 MTCO2P20-201ENST00000437339 673 ntBASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 AL022578.1-201ENST00000439330 1433 ntBASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 AC099563.1-201ENST00000456086 418 ntBASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 RPL31P50-201ENST00000471002 296 ntBASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 AC105185.1-201ENST00000518705 535 ntBASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 COX6CP8-201ENST00000522620 226 ntBASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 OR6C7P-201ENST00000547875 934 ntBASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 AL391156.1-201ENST00000554965 554 ntBASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms