Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC111000.2-201ENST00000507775 550 ntBASIC2.92□□□□□ -1.94
TREX1Q9NSU2 AC010468.3-201ENST00000508225 458 ntBASIC2.92□□□□□ -1.94
TREX1Q9NSU2 POU5F1P7-201ENST00000508759 541 ntBASIC2.92□□□□□ -1.94
TREX1Q9NSU2 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.92□□□□□ -1.94
TREX1Q9NSU2 OSBPL9P3-201ENST00000534523 595 ntBASIC2.92□□□□□ -1.94
TREX1Q9NSU2 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.92□□□□□ -1.94
TREX1Q9NSU2 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.92□□□□□ -1.94
TREX1Q9NSU2 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.92□□□□□ -1.94
TREX1Q9NSU2 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.92□□□□□ -1.94
TREX1Q9NSU2 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.92□□□□□ -1.94
TREX1Q9NSU2 KATNBL1P5-201ENST00000605015 517 ntBASIC2.92□□□□□ -1.94
TREX1Q9NSU2 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.92□□□□□ -1.94
TREX1Q9NSU2 AC091046.2-201ENST00000620775 665 ntBASIC2.92□□□□□ -1.94
TREX1Q9NSU2 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.92□□□□□ -1.94
TREX1Q9NSU2 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.92□□□□□ -1.94
TREX1Q9NSU2 AC068620.4-201ENST00000636730 1182 ntBASIC2.92□□□□□ -1.94
TREX1Q9NSU2 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.92□□□□□ -1.94
TREX1Q9NSU2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TREX1Q9NSU2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TREX1Q9NSU2 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
TREX1Q9NSU2 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TREX1Q9NSU2 MTND4P21-201ENST00000453886 1357 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TREX1Q9NSU2 SNORA9.2-201ENST00000365361 133 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 RNU6-650P-201ENST00000365658 111 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 MIR181B1-201ENST00000385240 110 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 MT-TC-201ENST00000387405 66 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 ATP5F1P6-201ENST00000402768 767 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.91□□□□□ -1.94
TREX1Q9NSU2 MTCO3P12-201ENST00000416718 547 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 HSFY1P1-201ENST00000423928 1178 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 VN1R42P-201ENST00000424651 344 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 DUTP6-201ENST00000425573 462 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 AC006946.1-201ENST00000429106 328 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.91□□□□□ -1.94
TREX1Q9NSU2 AL592437.1-201ENST00000443781 492 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 BX248409.1-201ENST00000455497 255 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 MTCYBP37-201ENST00000510642 1133 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.91□□□□□ -1.94
TREX1Q9NSU2 AC009812.2-201ENST00000517657 457 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.91□□□□□ -1.94
TREX1Q9NSU2 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.91□□□□□ -1.94
TREX1Q9NSU2 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.91□□□□□ -1.94
TREX1Q9NSU2 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.91□□□□□ -1.94
TREX1Q9NSU2 AL731537.2-201ENST00000561565 951 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 AC010653.1-201ENST00000571108 881 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 AC078899.3-201ENST00000599065 212 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 AC103881.1-201ENST00000603476 538 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 AC024220.1-201ENST00000603675 484 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 AC009220.3-201ENST00000604318 586 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.91□□□□□ -1.94
TREX1Q9NSU2 AL159169.3-201ENST00000608871 561 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 AC090115.4-201ENST00000609970 188 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.91□□□□□ -1.94
TREX1Q9NSU2 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 AC002076.2-201ENST00000617362 122 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.91□□□□□ -1.94
TREX1Q9NSU2 Z99129.2-201ENST00000619967 314 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 MIR8057-201ENST00000620957 69 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 AC010338.1-201ENST00000621823 717 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 AC091953.5-201ENST00000622919 233 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 AC004777.1-201ENST00000624317 287 ntBASIC2.91□□□□□ -1.94
TREX1Q9NSU2 AC096644.4-201ENST00000563417 2912 ntBASIC2.9□□□□□ -1.94
TREX1Q9NSU2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
TREX1Q9NSU2 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.9□□□□□ -1.94
TREX1Q9NSU2 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
TREX1Q9NSU2 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
TREX1Q9NSU2 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
TREX1Q9NSU2 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
TREX1Q9NSU2 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TREX1Q9NSU2 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
TREX1Q9NSU2 RNU6-263P-201ENST00000363811 107 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 SSXP10-201ENST00000402595 565 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 RNU4-78P-201ENST00000410940 126 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 UBE2V1P9-201ENST00000414760 368 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 NDUFB4P5-201ENST00000415445 361 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 ATG3P1-201ENST00000419507 911 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 YPEL5P1-201ENST00000419731 367 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 PAICSP7-201ENST00000419829 962 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.9□□□□□ -1.95
TREX1Q9NSU2 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TREX1Q9NSU2 MTATP6P4-201ENST00000427725 675 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 snoU13.3-201ENST00000459441 104 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TREX1Q9NSU2 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.9□□□□□ -1.95
TREX1Q9NSU2 OR52A4P-202ENST00000481634 799 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 GAPDHP39-201ENST00000481866 979 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TREX1Q9NSU2 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TREX1Q9NSU2 KLHL2P1-201ENST00000508691 521 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 SNORA31.1-201ENST00000515993 133 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 SNORA31.5-201ENST00000516190 133 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.9□□□□□ -1.95
TREX1Q9NSU2 AC022690.1-201ENST00000526681 550 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TREX1Q9NSU2 AP003385.6-201ENST00000531603 374 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.9□□□□□ -1.95
TREX1Q9NSU2 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms