Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 AP004371.1-201ENST00000525240 214 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 HIGD1AP10-201ENST00000527837 282 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 AC091489.2-201ENST00000566263 604 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 MIR5684-201ENST00000585074 65 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 BCRP9-201ENST00000605312 388 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 AC012360.2-201ENST00000609349 391 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 AL356585.4-201ENST00000623078 1229 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 EXOC5P1-201ENST00000510543 1969 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 RNU5F-6P-201ENST00000362979 116 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 RNU6-1207P-201ENST00000384343 107 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 U8.14-201ENST00000390843 143 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 MIR1183-201ENST00000408856 89 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 AC011933.1-201ENST00000413334 321 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 AC109780.2-201ENST00000413467 845 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 RPL36AP36-201ENST00000418616 301 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 BTF3P10-201ENST00000433415 495 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 RPL37P21-201ENST00000435890 276 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 AF228730.2-201ENST00000438784 848 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 AL356535.1-201ENST00000440335 398 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 BMI1P1-201ENST00000445879 941 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 AC009961.3-201ENST00000449832 765 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 FABP3P2-201ENST00000453169 399 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 AC116533.1-201ENST00000459748 321 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 RPS23P7-201ENST00000466210 444 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 AC069499.1-201ENST00000489433 509 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 AC026979.1-201ENST00000492525 396 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 RPL7P24-201ENST00000493052 752 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 ACTR3BP3-201ENST00000565577 979 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 MIR4277-201ENST00000578298 84 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 AC010928.3-201ENST00000587712 541 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 PRELID3BP8-201ENST00000604148 295 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 AC080013.6-201ENST00000606185 215 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 AL031775.1-201ENST00000607014 887 ntBASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC6A13Q9NSD5 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 Z82217.1-201ENST00000625157 8149 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 RNU4-21P-201ENST00000362802 126 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 RNU6-97P-201ENST00000363387 104 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 RNU6-853P-201ENST00000364306 107 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 RNA5SP509-201ENST00000364577 119 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 RPS7P15-201ENST00000415804 584 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 AC099677.1-201ENST00000420575 175 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 AC091862.1-201ENST00000438016 1100 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms