Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 AC092185.1-201ENST00000491371 97 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 RNU6-27P-201ENST00000516146 107 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 SNORA31.8-201ENST00000516327 108 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 RNU6-711P-201ENST00000517255 106 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 AP001804.3-201ENST00000525146 880 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 AC022690.1-201ENST00000526681 550 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 AC018630.1-201ENST00000541376 925 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 AL162713.1-201ENST00000604480 262 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 AC120053.1-201ENST00000607706 736 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 AL157817.1-201ENST00000614264 790 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.34□□□□□ -1.88
POLR1EQ9GZS1 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 RNU1-75P-201ENST00000347264 129 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 RNU5B-1-201ENST00000363286 116 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 RPS3AP25-201ENST00000411660 793 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 AC092638.1-201ENST00000411966 1275 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 AC092447.6-201ENST00000414578 210 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 MTCO3P1-205ENST00000422088 832 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 AL389915.1-201ENST00000422463 466 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 RPL31P12-201ENST00000422587 358 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 GLRXP1-201ENST00000423261 334 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 MTCYBP32-201ENST00000427945 1084 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 BX679664.1-201ENST00000434429 253 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 MTND4LP10-201ENST00000435146 291 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 MTCYBP34-201ENST00000439552 670 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 HMGB3P11-201ENST00000440127 604 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 Z99127.3-201ENST00000448158 395 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 PRSS3P4-201ENST00000453323 162 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 AC015908.1-201ENST00000478739 476 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 AC092902.1-201ENST00000486999 259 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 NAMPTP2-201ENST00000505629 1115 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 AC110794.1-201ENST00000505816 425 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 MTND1P36-201ENST00000522384 936 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 ERHP1-201ENST00000523006 310 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 AC092451.2-201ENST00000538746 658 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 HIGD1AP1-201ENST00000550979 275 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 TRAV37-201ENST00000553906 342 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 MTCYBP27-201ENST00000555160 670 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 ZNF971P-201ENST00000562068 1249 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 FAM60BP-201ENST00000578364 658 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 AC090330.1-201ENST00000588646 764 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 AC012669.1-201ENST00000603209 283 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 MTATP6P2-201ENST00000603319 678 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 AC010738.1-201ENST00000604970 987 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 BNIP3P19-201ENST00000605397 577 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 MIR92B-201ENST00000607575 96 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 AC002076.2-201ENST00000617362 122 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 AC006111.3-201ENST00000622137 383 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 AC026634.1-201ENST00000634369 198 ntBASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
POLR1EQ9GZS1 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 HMGB1P5-201ENST00000255320 642 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 RNA5SP171-201ENST00000391071 115 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 CYCSP45-201ENST00000402289 315 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 RNU2-28P-201ENST00000410457 189 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 RNA5SP229-201ENST00000410809 99 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 RNA5SP31-201ENST00000411144 127 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 BOLA3P4-201ENST00000418151 400 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 KRR1P1-201ENST00000419430 803 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 AC012497.1-201ENST00000429392 575 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 AC092393.1-201ENST00000439625 742 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms