Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC024940.5-201ENST00000622889 474 ntBASIC5.66□□□□□ -1.5
CNTNAP4Q9C0A0 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CNTNAP4Q9C0A0 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
CNTNAP4Q9C0A0 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP4Q9C0A0 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CNTNAP4Q9C0A0 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP4Q9C0A0 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.66□□□□□ -1.5
CNTNAP4Q9C0A0 RLIMP2-201ENST00000427891 1563 ntBASIC5.66□□□□□ -1.5
CNTNAP4Q9C0A0 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CNTNAP4Q9C0A0 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNTNAP4Q9C0A0 AC109446.4-201ENST00000623235 2755 ntBASIC5.65□□□□□ -1.5
CNTNAP4Q9C0A0 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.65□□□□□ -1.5
CNTNAP4Q9C0A0 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.65□□□□□ -1.5
CNTNAP4Q9C0A0 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNTNAP4Q9C0A0 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CNTNAP4Q9C0A0 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CNTNAP4Q9C0A0 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CNTNAP4Q9C0A0 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.65□□□□□ -1.5
CNTNAP4Q9C0A0 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
CNTNAP4Q9C0A0 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CNTNAP4Q9C0A0 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 RNU6-777P-201ENST00000364265 104 ntBASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 Y_RNA.315-201ENST00000365117 102 ntBASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 RPL7P25-201ENST00000404151 721 ntBASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 AL359704.1-201ENST00000411586 781 ntBASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 MTCO2P5-201ENST00000422621 426 ntBASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 AL117339.2-201ENST00000430475 180 ntBASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 AC114495.1-201ENST00000441274 436 ntBASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 RPL21P89-201ENST00000444021 467 ntBASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 BTF3P6-201ENST00000448054 499 ntBASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 AC245028.2-201ENST00000458673 253 ntBASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 SNORD60.2-201ENST00000516883 86 ntBASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 AC122134.1-201ENST00000565664 1104 ntBASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 AC017100.2-201ENST00000584628 355 ntBASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 AC008121.3-201ENST00000618726 433 ntBASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 AC104260.2-201ENST00000623551 3497 ntBASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CNTNAP4Q9C0A0 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 ADAM24P-201ENST00000398655 2101 ntBASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 AP002907.1-201ENST00000606361 1430 ntBASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 Y_RNA.474-201ENST00000384341 102 ntBASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 AL122016.1-201ENST00000403365 367 ntBASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 AL354719.1-201ENST00000406535 843 ntBASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 AC104333.2-201ENST00000422630 192 ntBASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 RSU1P2-202ENST00000437884 485 ntBASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 CBX1P4-201ENST00000439415 457 ntBASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 AC012671.1-201ENST00000451912 203 ntBASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 AC020890.1-201ENST00000491837 504 ntBASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 AP003181.2-201ENST00000528941 181 ntBASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 AC015912.2-201ENST00000571053 181 ntBASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 RPL7P50-201ENST00000600588 727 ntBASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 BX664608.1-201ENST00000610519 487 ntBASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 AC078899.5-201ENST00000612475 178 ntBASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 MIR1302-1-201ENST00000637932 143 ntBASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
CNTNAP4Q9C0A0 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms