Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 SNORA64.1-201ENST00000362600 132 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 Y_RNA.73-201ENST00000362910 113 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 RNU6-942P-201ENST00000363002 107 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 SNORD113-8-201ENST00000363497 74 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 Y_RNA.182-201ENST00000363880 111 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 RNU4-1-201ENST00000363925 141 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 RNU6-326P-201ENST00000365480 107 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 CRP-204ENST00000368112 787 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 ADIG-201ENST00000373348 430 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 Y_RNA.439-201ENST00000384119 94 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 SNORA51.5-201ENST00000384126 131 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 RNU6-769P-201ENST00000384407 104 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 Y_RNA.544-201ENST00000384650 113 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 MIR625-201ENST00000385047 85 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 SNORA17A-201ENST00000391185 133 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 MIR450B-201ENST00000401182 78 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 Y_RNA.630-201ENST00000411370 108 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 POLHP1-201ENST00000411806 470 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AC096644.3-201ENST00000416788 338 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 DPPA2P2-201ENST00000418220 897 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 BX510359.3-201ENST00000422168 306 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AL353777.1-201ENST00000425552 326 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AC006946.1-201ENST00000429106 328 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AC126120.1-201ENST00000431082 470 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AL606490.7-201ENST00000433136 191 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 HMGB3P24-201ENST00000433260 622 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 PPIAP17-201ENST00000438507 471 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AL138799.3-201ENST00000438968 350 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 EEF1B2P6-201ENST00000445713 673 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 SDC4P-201ENST00000453285 601 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AL035090.1-201ENST00000454835 332 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AC004801.2-202ENST00000463559 283 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AC112206.1-201ENST00000468416 477 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 RPL7L1P8-201ENST00000469911 741 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 RN7SL273P-201ENST00000481561 299 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 RPS4XP18-201ENST00000495480 763 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AC092436.1-201ENST00000506450 503 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 RNU6-344P-201ENST00000516635 111 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 RNA5SP400-201ENST00000517155 111 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 IGKV2-19-201ENST00000518132 283 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 IGHVIII-47-1-201ENST00000518187 331 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AC012339.2-201ENST00000523996 453 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AC130364.2-201ENST00000528639 604 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 TXNP4-201ENST00000575018 310 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 MIR5583-1-201ENST00000580941 59 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 MIR132-201ENST00000591554 101 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AL121917.1-203ENST00000605534 577 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AC023509.5-201ENST00000617434 807 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AC245014.3-201ENST00000618589 347 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AL121890.5-201ENST00000620848 304 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AL357559.1-201ENST00000622228 274 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AC097372.5-201ENST00000623665 376 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 SNORA17.5-201ENST00000630429 132 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AL731556.1-201ENST00000394628 3711 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AL139805.2-201ENST00000455305 2433 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AC110373.1-201ENST00000505994 3505 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AL133383.2-201ENST00000622958 2336 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AL731532.1-201ENST00000623972 4236 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 DMD-228ENST00000541735 7080 ntTSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms