Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.67□□□□□ -1.82
PCGF1Q9BSM1 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCGF1Q9BSM1 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCGF1Q9BSM1 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.67□□□□□ -1.82
PCGF1Q9BSM1 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.67□□□□□ -1.82
PCGF1Q9BSM1 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCGF1Q9BSM1 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 NXPH1-205ENST00000602349 1953 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 RNU5E-5P-201ENST00000365379 116 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 RNU1-63P-201ENST00000383902 164 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 RNU1-44P-201ENST00000384453 163 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 RNY3P10-201ENST00000384764 102 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 SNORA74C-2-201ENST00000411179 201 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 RPS20P14-201ENST00000412545 360 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 TOMM22P1-201ENST00000418578 312 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 AL159169.1-201ENST00000421119 127 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 MTND1P28-201ENST00000435623 950 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 THAP5P1-201ENST00000439089 262 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 RPL23AP43-201ENST00000446445 471 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 SNORD121B-201ENST00000458838 81 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 AP000873.1-201ENST00000463987 400 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 AC078817.1-201ENST00000492623 435 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 RNU6-1095P-201ENST00000516148 108 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 AP004371.1-201ENST00000525240 214 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 MTND4LP18-201ENST00000526864 291 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 CR383656.7-201ENST00000548164 174 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 AC068831.4-201ENST00000556118 109 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 MTCYBP33-201ENST00000575007 1130 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 AC040904.1-201ENST00000590850 223 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 AC068276.1-201ENST00000605793 379 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 RN7SKP299-201ENST00000606679 301 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 AC002550.2-201ENST00000621246 394 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 AC105074.1-201ENST00000623380 3095 ntBASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
PCGF1Q9BSM1 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
PCGF1Q9BSM1 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PCGF1Q9BSM1 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
PCGF1Q9BSM1 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 RNA5SP307-201ENST00000362863 116 ntBASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 RNU4-91P-201ENST00000364778 135 ntBASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 RPL23AP26-201ENST00000412728 464 ntBASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 RPS7P13-201ENST00000413955 498 ntBASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 RPS29P17-201ENST00000430795 166 ntBASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 AC108734.1-201ENST00000439549 399 ntBASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 RPS20P32-201ENST00000456044 356 ntBASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 HMGB3P30-201ENST00000457863 606 ntBASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 RN7SL303P-201ENST00000469773 251 ntBASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 AC108064.1-201ENST00000513791 460 ntBASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 FABP5P5-201ENST00000515537 406 ntBASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 AP002748.2-201ENST00000528671 348 ntBASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 AL121603.1-201ENST00000553815 142 ntBASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 AC010928.3-201ENST00000587712 541 ntBASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 TPMTP1-201ENST00000592307 737 ntBASIC3.65□□□□□ -1.83
PCGF1Q9BSM1 AC020914.4-201ENST00000597690 277 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms