Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 AL592310.1-201ENST00000414330 671 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.05□□□□□ -1.92
EBF4Q9BQW3 AC063979.1-201ENST00000415539 377 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.05□□□□□ -1.92
EBF4Q9BQW3 AC092634.6-201ENST00000418558 192 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 AC005517.2-201ENST00000424673 553 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.05□□□□□ -1.92
EBF4Q9BQW3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
EBF4Q9BQW3 KCTD10P1-201ENST00000434203 625 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 AC122718.1-201ENST00000439448 744 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.05□□□□□ -1.92
EBF4Q9BQW3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.05□□□□□ -1.92
EBF4Q9BQW3 RPL29P29-201ENST00000448725 423 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 NUTF2P7-201ENST00000453086 375 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 RPL21P41-201ENST00000459863 264 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.05□□□□□ -1.92
EBF4Q9BQW3 ACTR3P3-201ENST00000480448 893 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 AC106707.2-201ENST00000484182 374 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
EBF4Q9BQW3 PTGES3P3-201ENST00000511479 482 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 AC104057.1-201ENST00000515547 497 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.05□□□□□ -1.92
EBF4Q9BQW3 LRRC34P1-201ENST00000542742 915 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 AL132857.1-201ENST00000555180 708 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.05□□□□□ -1.92
EBF4Q9BQW3 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.05□□□□□ -1.92
EBF4Q9BQW3 AC055876.1-202ENST00000567053 138 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.05□□□□□ -1.92
EBF4Q9BQW3 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.05□□□□□ -1.92
EBF4Q9BQW3 HMGN2P28-201ENST00000606102 262 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 AC106052.1-201ENST00000608029 497 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 MIR378J-201ENST00000611988 109 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 PART1_2.1-201ENST00000612397 250 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.05□□□□□ -1.92
EBF4Q9BQW3 AL121895.2-201ENST00000619558 447 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
EBF4Q9BQW3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.05□□□□□ -1.92
EBF4Q9BQW3 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.04□□□□□ -1.92
EBF4Q9BQW3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
EBF4Q9BQW3 MAPK10-362ENST00000641864 4484 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
EBF4Q9BQW3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
EBF4Q9BQW3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
EBF4Q9BQW3 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
EBF4Q9BQW3 AL353746.1-201ENST00000566293 6881 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
EBF4Q9BQW3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.04□□□□□ -1.92
EBF4Q9BQW3 HMGB1P5-201ENST00000255320 642 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 RNU6-251P-201ENST00000363235 104 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 SNORA51.4-201ENST00000364993 124 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 RNU6-657P-201ENST00000383904 107 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 SNORA5A-201ENST00000384111 134 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 MIR181B1-201ENST00000385240 110 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.04□□□□□ -1.92
EBF4Q9BQW3 HSFY4P-201ENST00000415994 1181 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 KRR1P1-201ENST00000419430 803 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 NANOGP5-201ENST00000424456 877 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 AC004975.1-201ENST00000428733 208 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 MTCO1P3-201ENST00000429327 192 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 OR2B8P-201ENST00000432841 938 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
EBF4Q9BQW3 AC093155.1-201ENST00000440164 826 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 AC092641.1-201ENST00000440229 772 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 AL358794.1-201ENST00000445689 381 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 RPL21P23-201ENST00000446654 460 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 MTND1P31-201ENST00000449206 961 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 AC112492.1-201ENST00000449607 712 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 AC104073.1-201ENST00000451988 151 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 HMGN3P1-201ENST00000453847 193 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 RPL7P5-201ENST00000471472 736 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 RN7SL20P-201ENST00000488827 297 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 AC084024.2-201ENST00000503480 791 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 AC112673.1-201ENST00000513168 575 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.04□□□□□ -1.92
EBF4Q9BQW3 SNORA48.10-201ENST00000516965 160 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 RNU4-60P-201ENST00000517239 135 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.04□□□□□ -1.92
EBF4Q9BQW3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.04□□□□□ -1.92
EBF4Q9BQW3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.04□□□□□ -1.92
EBF4Q9BQW3 HIGD1AP1-201ENST00000550979 275 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.04□□□□□ -1.92
EBF4Q9BQW3 OR4G1P-201ENST00000588632 938 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 CCDC58P3-201ENST00000590792 430 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 Z99289.3-201ENST00000605586 594 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.04□□□□□ -1.92
EBF4Q9BQW3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.04□□□□□ -1.92
EBF4Q9BQW3 AC010975.3-201ENST00000618727 978 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 AC109454.4-201ENST00000623411 649 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 ZNF663P-202ENST00000641770 1131 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 AP005901.5-201ENST00000545779 1796 ntBASIC3.04□□□□□ -1.92
EBF4Q9BQW3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
EBF4Q9BQW3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
EBF4Q9BQW3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.03□□□□□ -1.92
EBF4Q9BQW3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
EBF4Q9BQW3 SNORA31-201ENST00000362607 130 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 RNA5SP295-201ENST00000362655 121 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 RNU6-356P-201ENST00000384140 107 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 MIR141-201ENST00000384975 95 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms