Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC019193.2-201ENST00000610012 634 ntBASIC3.14□□□□□ -1.91
VGLL1Q99990 AC025588.4-201ENST00000615802 908 ntBASIC3.14□□□□□ -1.91
VGLL1Q99990 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.14□□□□□ -1.91
VGLL1Q99990 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.14□□□□□ -1.91
VGLL1Q99990 AC140479.6-201ENST00000633535 357 ntBASIC3.14□□□□□ -1.91
VGLL1Q99990 AC093591.3-201ENST00000634516 308 ntBASIC3.14□□□□□ -1.91
VGLL1Q99990 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VGLL1Q99990 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VGLL1Q99990 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
VGLL1Q99990 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.14□□□□□ -1.91
VGLL1Q99990 AL118496.1-201ENST00000440201 1812 ntBASIC3.14□□□□□ -1.91
VGLL1Q99990 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
VGLL1Q99990 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.14□□□□□ -1.91
VGLL1Q99990 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VGLL1Q99990 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.13□□□□□ -1.91
VGLL1Q99990 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
VGLL1Q99990 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
VGLL1Q99990 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VGLL1Q99990 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
VGLL1Q99990 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
VGLL1Q99990 AL022578.1-201ENST00000439330 1433 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
VGLL1Q99990 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
VGLL1Q99990 OR11H4-201ENST00000315409 1082 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 RNY4P24-201ENST00000362735 96 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 RNU5F-7P-201ENST00000363696 115 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 RN7SKP226-201ENST00000364912 300 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
VGLL1Q99990 SNORA40.3-201ENST00000390964 122 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 AC016769.3-201ENST00000396562 315 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 RPS4XP9-201ENST00000405151 780 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.13□□□□□ -1.91
VGLL1Q99990 MIR548F1-201ENST00000408667 84 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 AL133384.1-201ENST00000412744 351 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.13□□□□□ -1.91
VGLL1Q99990 MTND1P23-201ENST00000416931 372 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 COX6CP17-201ENST00000421389 185 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.13□□□□□ -1.91
VGLL1Q99990 AL356387.2-201ENST00000422272 243 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 AL513174.1-201ENST00000423182 629 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.13□□□□□ -1.91
VGLL1Q99990 AC023347.2-201ENST00000433994 462 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 AC091862.1-201ENST00000438016 1100 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 RBMX2P4-201ENST00000441256 376 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 RPS26P56-201ENST00000444468 240 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 ARPC3P5-201ENST00000448802 534 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 RPS7P7-201ENST00000463499 571 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 KLF3P2-201ENST00000465138 268 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
VGLL1Q99990 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.13□□□□□ -1.91
VGLL1Q99990 AC108941.1-201ENST00000502853 530 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.13□□□□□ -1.91
VGLL1Q99990 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VGLL1Q99990 AC026412.2-201ENST00000512270 1075 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.13□□□□□ -1.91
VGLL1Q99990 HSPA8P13-201ENST00000523715 472 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.13□□□□□ -1.91
VGLL1Q99990 MTCYBP41-201ENST00000528913 1123 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.13□□□□□ -1.91
VGLL1Q99990 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.13□□□□□ -1.91
VGLL1Q99990 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.13□□□□□ -1.91
VGLL1Q99990 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.13□□□□□ -1.91
VGLL1Q99990 OR6C73P-201ENST00000546432 358 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.13□□□□□ -1.91
VGLL1Q99990 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.13□□□□□ -1.91
VGLL1Q99990 AC136619.2-201ENST00000563361 631 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.13□□□□□ -1.91
VGLL1Q99990 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.13□□□□□ -1.91
VGLL1Q99990 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.13□□□□□ -1.91
VGLL1Q99990 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.13□□□□□ -1.91
VGLL1Q99990 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.13□□□□□ -1.91
VGLL1Q99990 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.13□□□□□ -1.91
VGLL1Q99990 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.13□□□□□ -1.91
VGLL1Q99990 BNIP3P11-201ENST00000603878 563 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 PRELID3BP8-201ENST00000604148 295 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.13□□□□□ -1.91
VGLL1Q99990 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.13□□□□□ -1.91
VGLL1Q99990 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.13□□□□□ -1.91
VGLL1Q99990 AC131902.3-201ENST00000611767 581 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 AL391261.4-201ENST00000616012 481 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 U6atac.1-201ENST00000616025 117 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.13□□□□□ -1.91
VGLL1Q99990 AC099654.13-201ENST00000639774 207 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
VGLL1Q99990 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VGLL1Q99990 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VGLL1Q99990 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VGLL1Q99990 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.13□□□□□ -1.91
VGLL1Q99990 TNPO1P3-201ENST00000436471 2662 ntBASIC3.13□□□□□ -1.91
VGLL1Q99990 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.12□□□□□ -1.91
VGLL1Q99990 SAGE4P-201ENST00000442271 3381 ntBASIC3.12□□□□□ -1.91
VGLL1Q99990 MAPK10-373ENST00000641983 6772 ntBASIC3.12□□□□□ -1.91
VGLL1Q99990 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.12□□□□□ -1.91
VGLL1Q99990 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
VGLL1Q99990 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
VGLL1Q99990 OR4G2P-201ENST00000328113 903 ntBASIC3.12□□□□□ -1.91
VGLL1Q99990 RNU6-289P-201ENST00000364093 107 ntBASIC3.12□□□□□ -1.91
VGLL1Q99990 RNU1-85P-201ENST00000364127 164 ntBASIC3.12□□□□□ -1.91
VGLL1Q99990 MIR192-201ENST00000384915 110 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms