Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 MIR1284-201ENST00000408337 120 ntBASIC3.32□□□□□ -1.88
SSX3Q99909 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.32□□□□□ -1.88
SSX3Q99909 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.32□□□□□ -1.88
SSX3Q99909 HMGB1P49-201ENST00000418882 569 ntBASIC3.32□□□□□ -1.88
SSX3Q99909 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.32□□□□□ -1.88
SSX3Q99909 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.32□□□□□ -1.88
SSX3Q99909 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.32□□□□□ -1.88
SSX3Q99909 AC096638.2-201ENST00000434965 711 ntBASIC3.32□□□□□ -1.88
SSX3Q99909 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.32□□□□□ -1.88
SSX3Q99909 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.32□□□□□ -1.88
SSX3Q99909 MTND3P1-201ENST00000441336 220 ntBASIC3.32□□□□□ -1.88
SSX3Q99909 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.32□□□□□ -1.88
SSX3Q99909 HSPE1P28-201ENST00000443139 211 ntBASIC3.32□□□□□ -1.88
SSX3Q99909 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.32□□□□□ -1.88
SSX3Q99909 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.32□□□□□ -1.88
SSX3Q99909 RPL7P18-201ENST00000478965 734 ntBASIC3.32□□□□□ -1.88
SSX3Q99909 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.32□□□□□ -1.88
SSX3Q99909 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.32□□□□□ -1.88
SSX3Q99909 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.32□□□□□ -1.88
SSX3Q99909 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.32□□□□□ -1.88
SSX3Q99909 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.32□□□□□ -1.88
SSX3Q99909 AC022861.1-201ENST00000522981 663 ntBASIC3.32□□□□□ -1.88
SSX3Q99909 OR5AK1P-201ENST00000524837 922 ntBASIC3.32□□□□□ -1.88
SSX3Q99909 MTCO2P15-201ENST00000532655 656 ntBASIC3.32□□□□□ -1.88
SSX3Q99909 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.32□□□□□ -1.88
SSX3Q99909 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.32□□□□□ -1.88
SSX3Q99909 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.32□□□□□ -1.88
SSX3Q99909 AL391156.1-201ENST00000554965 554 ntBASIC3.32□□□□□ -1.88
SSX3Q99909 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.32□□□□□ -1.88
SSX3Q99909 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.32□□□□□ -1.88
SSX3Q99909 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.32□□□□□ -1.88
SSX3Q99909 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.32□□□□□ -1.88
SSX3Q99909 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.32□□□□□ -1.88
SSX3Q99909 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.32□□□□□ -1.88
SSX3Q99909 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.32□□□□□ -1.88
SSX3Q99909 AC245297.2-201ENST00000610119 565 ntBASIC3.32□□□□□ -1.88
SSX3Q99909 AP002782.1-201ENST00000623107 614 ntBASIC3.32□□□□□ -1.88
SSX3Q99909 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.32□□□□□ -1.88
SSX3Q99909 SNORA50A-202ENST00000629536 136 ntBASIC3.32□□□□□ -1.88
SSX3Q99909 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.32□□□□□ -1.88
SSX3Q99909 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SSX3Q99909 AP000776.1-201ENST00000530032 1663 ntBASIC3.32□□□□□ -1.88
SSX3Q99909 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SSX3Q99909 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSX3Q99909 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SSX3Q99909 ZNF876P-202ENST00000398732 1485 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 AL356473.1-201ENST00000406203 1408 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SSX3Q99909 SNORA60-201ENST00000362396 134 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 RNU1-64P-201ENST00000365443 163 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 RPL23AP29-201ENST00000397284 453 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 HMGB1P17-201ENST00000403495 628 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.31□□□□□ -1.88
SSX3Q99909 PPIAP31-201ENST00000405422 495 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 AL354719.1-201ENST00000406535 843 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 HSPE1P12-201ENST00000412576 301 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 HMGB3P23-201ENST00000414981 585 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 MRPL50P2-201ENST00000416821 482 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 MTATP6P27-201ENST00000416987 621 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.31□□□□□ -1.88
SSX3Q99909 MTCO1P39-201ENST00000426148 480 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.31□□□□□ -1.88
SSX3Q99909 AL590233.1-201ENST00000430017 456 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 RPS25P9-201ENST00000435591 252 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 MTCO2P20-201ENST00000437339 673 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 AC006011.1-201ENST00000442758 349 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 RPS4XP4-201ENST00000443195 763 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 Z95327.1-201ENST00000446082 482 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 NANOGP10-201ENST00000453325 895 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.31□□□□□ -1.88
SSX3Q99909 RPL36AP13-201ENST00000457490 317 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 AC097493.1-201ENST00000463958 372 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.31□□□□□ -1.88
SSX3Q99909 RPL29P14-201ENST00000495837 428 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.31□□□□□ -1.88
SSX3Q99909 AC026784.1-201ENST00000507986 352 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SSX3Q99909 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.31□□□□□ -1.88
SSX3Q99909 AC006499.2-201ENST00000513470 337 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 AC010265.1-201ENST00000513509 211 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 AC093853.1-201ENST00000515689 483 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.31□□□□□ -1.88
SSX3Q99909 RNU6-711P-201ENST00000517255 106 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 IGKV2-38-201ENST00000517443 247 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 ERHP1-201ENST00000523006 310 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.31□□□□□ -1.88
SSX3Q99909 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.31□□□□□ -1.88
SSX3Q99909 UBE2NP1-201ENST00000545592 458 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 MTND1P24-201ENST00000552175 861 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 AC053481.3-201ENST00000577881 843 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 AC061975.8-201ENST00000587058 721 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.31□□□□□ -1.88
SSX3Q99909 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.31□□□□□ -1.88
SSX3Q99909 AL158042.1-201ENST00000605338 460 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 RNVU1-4-201ENST00000612985 164 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 AC090246.1-201ENST00000616499 426 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 AP005264.7-201ENST00000625003 745 ntBASIC3.31□□□□□ -1.88
SSX3Q99909 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SSX3Q99909 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.31□□□□□ -1.88
SSX3Q99909 IPO8P1-201ENST00000455509 3109 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms