Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC034229.6-201ENST00000623704 224 ntBASIC6.39□□□□□ -1.39
PHOX2BQ99453 TEX41-280ENST00000629185 591 ntTSL 5 BASIC6.39□□□□□ -1.39
PHOX2BQ99453 MIR1244-3-201ENST00000635744 85 ntBASIC6.39□□□□□ -1.39
PHOX2BQ99453 MIR1244-2-201ENST00000636449 85 ntBASIC6.39□□□□□ -1.39
PHOX2BQ99453 MIR1244-4-202ENST00000636813 85 ntBASIC6.39□□□□□ -1.39
PHOX2BQ99453 AC116667.2-201ENST00000641075 823 ntBASIC6.39□□□□□ -1.39
PHOX2BQ99453 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PHOX2BQ99453 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
PHOX2BQ99453 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
PHOX2BQ99453 PARP4P2-201ENST00000446672 3326 ntBASIC6.39□□□□□ -1.39
PHOX2BQ99453 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
PHOX2BQ99453 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
PHOX2BQ99453 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.39□□□□□ -1.39
PHOX2BQ99453 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PHOX2BQ99453 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PHOX2BQ99453 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
PHOX2BQ99453 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PHOX2BQ99453 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PHOX2BQ99453 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PHOX2BQ99453 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
PHOX2BQ99453 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PHOX2BQ99453 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
PHOX2BQ99453 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
PHOX2BQ99453 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.38□□□□□ -1.39
PHOX2BQ99453 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PHOX2BQ99453 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.38□□□□□ -1.39
PHOX2BQ99453 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PHOX2BQ99453 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PHOX2BQ99453 Y_RNA.150-201ENST00000363562 102 ntBASIC6.38□□□□□ -1.39
PHOX2BQ99453 SNORD73A-201ENST00000386062 65 ntBASIC6.38□□□□□ -1.39
PHOX2BQ99453 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC6.38□□□□□ -1.39
PHOX2BQ99453 RNU6-325P-201ENST00000411132 105 ntBASIC6.38□□□□□ -1.39
PHOX2BQ99453 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC6.38□□□□□ -1.39
PHOX2BQ99453 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC6.38□□□□□ -1.39
PHOX2BQ99453 AC092447.6-201ENST00000414578 210 ntBASIC6.38□□□□□ -1.39
PHOX2BQ99453 AL035660.1-201ENST00000422041 222 ntBASIC6.38□□□□□ -1.39
PHOX2BQ99453 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PHOX2BQ99453 CFL1P1-202ENST00000432948 411 ntBASIC6.38□□□□□ -1.39
PHOX2BQ99453 TPT1P13-201ENST00000449760 499 ntBASIC6.38□□□□□ -1.39
PHOX2BQ99453 AC009963.2-201ENST00000453431 138 ntBASIC6.38□□□□□ -1.39
PHOX2BQ99453 AZGP1P2-201ENST00000454506 345 ntBASIC6.38□□□□□ -1.39
PHOX2BQ99453 RPS23P5-201ENST00000495419 428 ntBASIC6.38□□□□□ -1.39
PHOX2BQ99453 MRPS33P2-201ENST00000507850 322 ntBASIC6.38□□□□□ -1.39
PHOX2BQ99453 AC007016.1-201ENST00000512110 244 ntBASIC6.38□□□□□ -1.39
PHOX2BQ99453 AC073581.1-201ENST00000519036 575 ntBASIC6.38□□□□□ -1.39
PHOX2BQ99453 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.38□□□□□ -1.39
PHOX2BQ99453 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.38□□□□□ -1.39
PHOX2BQ99453 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.38□□□□□ -1.39
PHOX2BQ99453 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.38□□□□□ -1.39
PHOX2BQ99453 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.38□□□□□ -1.39
PHOX2BQ99453 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.38□□□□□ -1.39
PHOX2BQ99453 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
PHOX2BQ99453 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.38□□□□□ -1.39
PHOX2BQ99453 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.38□□□□□ -1.39
PHOX2BQ99453 SNORD91B-202ENST00000608459 222 ntBASIC6.38□□□□□ -1.39
PHOX2BQ99453 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC6.38□□□□□ -1.39
PHOX2BQ99453 AL355834.1-201ENST00000556602 3965 ntBASIC6.38□□□□□ -1.39
PHOX2BQ99453 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
PHOX2BQ99453 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PHOX2BQ99453 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PHOX2BQ99453 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PHOX2BQ99453 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PHOX2BQ99453 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
PHOX2BQ99453 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.38□□□□□ -1.39
PHOX2BQ99453 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.38□□□□□ -1.39
PHOX2BQ99453 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PHOX2BQ99453 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
PHOX2BQ99453 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PHOX2BQ99453 AC009779.8-201ENST00000641684 4384 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 AL662795.2-201ENST00000624252 3706 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
PHOX2BQ99453 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PHOX2BQ99453 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PHOX2BQ99453 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
PHOX2BQ99453 AC139769.1-204ENST00000472297 1931 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PHOX2BQ99453 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
PHOX2BQ99453 RNU1-150P-201ENST00000362491 162 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 RNU6-989P-201ENST00000362756 107 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 Y_RNA.84-201ENST00000363011 104 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 RNU4-44P-201ENST00000363050 141 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC6.37□□□□□ -1.39
PHOX2BQ99453 RNU6-48P-201ENST00000384161 107 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 Y_RNA.539-201ENST00000384635 107 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 MTCO2P33-201ENST00000402100 465 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 U3.35-201ENST00000408405 208 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 EIF4EP2-201ENST00000422816 654 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 PPP1R11P2-201ENST00000423543 382 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 RPS27AP12-201ENST00000429552 465 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 AC092423.1-201ENST00000430165 186 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 FTLP19-201ENST00000433300 394 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 RPEP5-201ENST00000441137 268 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 MRPL48P1-201ENST00000445390 636 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 EEF1B2P6-201ENST00000445713 673 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 AL034399.1-201ENST00000451535 380 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 AL139109.1-201ENST00000455491 297 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.37□□□□□ -1.39
PHOX2BQ99453 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.37□□□□□ -1.39
PHOX2BQ99453 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.37□□□□□ -1.39
PHOX2BQ99453 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms