Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 SNORA84-201ENST00000459229 133 ntBASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 AL163540.1-201ENST00000485382 386 ntBASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 AC027369.5-201ENST00000533838 755 ntBASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 NCAPGP2-201ENST00000557911 754 ntBASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 AP001029.3-201ENST00000588063 596 ntBASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 AC020910.3-201ENST00000603701 874 ntBASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 AL078596.1-201ENST00000624856 447 ntBASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 MIR6830-201ENST00000636015 70 ntBASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 AC125336.1-201ENST00000508893 2827 ntBASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 AC010266.2-201ENST00000564741 3255 ntBASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 AL161781.1-201ENST00000354277 403 ntBASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 RNA5SP191-201ENST00000362585 102 ntBASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 RNU1-64P-201ENST00000365443 163 ntBASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 RNU6-574P-201ENST00000384265 107 ntBASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 RNU6-1297P-201ENST00000384415 104 ntBASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 RPL5P18-201ENST00000406671 891 ntBASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 RNU6-1304P-201ENST00000411374 106 ntBASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 COX5BP7-201ENST00000414780 274 ntBASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 AC245054.2-201ENST00000415639 319 ntBASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 SRIP2-201ENST00000428470 166 ntBASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 RPL23AP83-201ENST00000434984 473 ntBASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 Z95327.1-201ENST00000446082 482 ntBASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 OR1H1P-201ENST00000448731 937 ntBASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 MTND3P16-201ENST00000452205 344 ntBASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 SCARNA24.1-201ENST00000516465 137 ntBASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 RNA5SP337-201ENST00000517007 109 ntBASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 NARSP2-201ENST00000518524 679 ntBASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 OR4T1P-201ENST00000554933 911 ntBASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 AC006270.2-201ENST00000578523 652 ntBASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 MIR3668-201ENST00000582138 75 ntBASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 AL132822.1-201ENST00000617063 513 ntBASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 AL133216.2-202ENST00000634512 349 ntBASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SYNGAP1Q96PV0 AP004289.2-201ENST00000444413 1457 ntBASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 MTCO1P12-201ENST00000414273 1543 ntBASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 MAPK10-263ENST00000641052 4307 ntBASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 ADAM5-202ENST00000399789 1942 ntBASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 OR5P1P-201ENST00000299512 925 ntBASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 RNU6-28P-201ENST00000362378 107 ntBASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 RNU6-441P-201ENST00000384545 106 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms