Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SNAP23P1-201ENST00000433229 246 ntBASIC6.43□□□□□ -1.38
TRIM47Q96LD4 AL049745.1-201ENST00000433953 286 ntBASIC6.43□□□□□ -1.38
TRIM47Q96LD4 AL451139.1-201ENST00000434718 346 ntBASIC6.43□□□□□ -1.38
TRIM47Q96LD4 AC004383.1-201ENST00000438135 289 ntBASIC6.43□□□□□ -1.38
TRIM47Q96LD4 Y_RNA.644-201ENST00000459006 113 ntBASIC6.43□□□□□ -1.38
TRIM47Q96LD4 AC111193.1-201ENST00000504097 155 ntBASIC6.43□□□□□ -1.38
TRIM47Q96LD4 AC105384.2-201ENST00000508433 640 ntBASIC6.43□□□□□ -1.38
TRIM47Q96LD4 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM47Q96LD4 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM47Q96LD4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM47Q96LD4 RNU4-71P-201ENST00000516258 113 ntBASIC6.43□□□□□ -1.38
TRIM47Q96LD4 Y_RNA.674-201ENST00000516362 113 ntBASIC6.43□□□□□ -1.38
TRIM47Q96LD4 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC6.43□□□□□ -1.38
TRIM47Q96LD4 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM47Q96LD4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM47Q96LD4 AC025857.2-201ENST00000602711 238 ntBASIC6.43□□□□□ -1.38
TRIM47Q96LD4 FAM25E-202ENST00000608562 189 ntBASIC6.43□□□□□ -1.38
TRIM47Q96LD4 AC093799.2-201ENST00000610062 578 ntBASIC6.43□□□□□ -1.38
TRIM47Q96LD4 AC241377.1-201ENST00000619797 406 ntBASIC6.43□□□□□ -1.38
TRIM47Q96LD4 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM47Q96LD4 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
TRIM47Q96LD4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM47Q96LD4 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM47Q96LD4 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM47Q96LD4 NAMPTP1-201ENST00000440465 2514 ntBASIC6.43□□□□□ -1.38
TRIM47Q96LD4 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
TRIM47Q96LD4 MTCO1P24-201ENST00000515438 1558 ntBASIC6.43□□□□□ -1.38
TRIM47Q96LD4 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM47Q96LD4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM47Q96LD4 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM47Q96LD4 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 Y_RNA.65-201ENST00000362846 100 ntBASIC6.42□□□□□ -1.38
TRIM47Q96LD4 Y_RNA.200-201ENST00000364018 102 ntBASIC6.42□□□□□ -1.38
TRIM47Q96LD4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 DUTP5-201ENST00000406790 469 ntBASIC6.42□□□□□ -1.38
TRIM47Q96LD4 MIR1303-201ENST00000408625 86 ntBASIC6.42□□□□□ -1.38
TRIM47Q96LD4 RNU2-29P-201ENST00000410423 189 ntBASIC6.42□□□□□ -1.38
TRIM47Q96LD4 AL354868.1-201ENST00000417077 482 ntBASIC6.42□□□□□ -1.38
TRIM47Q96LD4 MRPS18CP6-201ENST00000423587 223 ntBASIC6.42□□□□□ -1.38
TRIM47Q96LD4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 C4BPAP2-201ENST00000428434 478 ntBASIC6.42□□□□□ -1.38
TRIM47Q96LD4 AC099799.1-201ENST00000439809 192 ntBASIC6.42□□□□□ -1.38
TRIM47Q96LD4 NDUFB1P2-201ENST00000449477 176 ntBASIC6.42□□□□□ -1.38
TRIM47Q96LD4 TPT1P13-201ENST00000449760 499 ntBASIC6.42□□□□□ -1.38
TRIM47Q96LD4 AC104849.1-201ENST00000462623 405 ntBASIC6.42□□□□□ -1.38
TRIM47Q96LD4 AC090686.1-201ENST00000481577 749 ntBASIC6.42□□□□□ -1.38
TRIM47Q96LD4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 TXNP6-201ENST00000510190 310 ntBASIC6.42□□□□□ -1.38
TRIM47Q96LD4 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 SCARNA16.2-201ENST00000516520 172 ntBASIC6.42□□□□□ -1.38
TRIM47Q96LD4 AC109329.1-201ENST00000518744 317 ntBASIC6.42□□□□□ -1.38
TRIM47Q96LD4 AC087441.2-201ENST00000529141 262 ntBASIC6.42□□□□□ -1.38
TRIM47Q96LD4 AC040926.1-201ENST00000530195 238 ntBASIC6.42□□□□□ -1.38
TRIM47Q96LD4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 AL356432.3-201ENST00000568952 465 ntBASIC6.42□□□□□ -1.38
TRIM47Q96LD4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 RAC1P9-201ENST00000604990 392 ntBASIC6.42□□□□□ -1.38
TRIM47Q96LD4 ATP5A1P2-202ENST00000616464 443 ntBASIC6.42□□□□□ -1.38
TRIM47Q96LD4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 AC091953.3-201ENST00000623220 236 ntBASIC6.42□□□□□ -1.38
TRIM47Q96LD4 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM47Q96LD4 THUMPD3P1-201ENST00000506556 1480 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 AL359893.1-201ENST00000447628 1580 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 AL034546.1-201ENST00000623740 3693 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 RNU5B-2P-201ENST00000363036 113 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 RNU1-43P-201ENST00000365052 165 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 RNU6-22P-201ENST00000384355 107 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 Y_RNA.577-201ENST00000384794 101 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 RNU1-149P-201ENST00000390870 161 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 RNA5SP36-201ENST00000410197 133 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 AC137499.1-201ENST00000427602 88 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 RPL23AP89-201ENST00000439324 255 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 NANOGP10-201ENST00000453325 895 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms