Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNX27Q96L92 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNX27Q96L92 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SNX27Q96L92 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SNX27Q96L92 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.54□□□□□ -1.68
SNX27Q96L92 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNX27Q96L92 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNX27Q96L92 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.54□□□□□ -1.68
SNX27Q96L92 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SNX27Q96L92 RNVU1-3-201ENST00000364313 161 ntBASIC4.54□□□□□ -1.68
SNX27Q96L92 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.54□□□□□ -1.68
SNX27Q96L92 MIR93-201ENST00000385024 80 ntBASIC4.54□□□□□ -1.68
SNX27Q96L92 RPL31P1-201ENST00000398116 372 ntBASIC4.54□□□□□ -1.68
SNX27Q96L92 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.54□□□□□ -1.68
SNX27Q96L92 AL031679.1-201ENST00000400616 525 ntBASIC4.54□□□□□ -1.68
SNX27Q96L92 RNA5SP104-201ENST00000410989 118 ntBASIC4.54□□□□□ -1.68
SNX27Q96L92 FNDC3CP-201ENST00000420795 1155 ntBASIC4.54□□□□□ -1.68
SNX27Q96L92 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.54□□□□□ -1.68
SNX27Q96L92 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.54□□□□□ -1.68
SNX27Q96L92 AC010153.1-201ENST00000432862 727 ntBASIC4.54□□□□□ -1.68
SNX27Q96L92 CYCSP43-201ENST00000438233 310 ntBASIC4.54□□□□□ -1.68
SNX27Q96L92 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX27Q96L92 AC017015.1-201ENST00000477387 286 ntBASIC4.54□□□□□ -1.68
SNX27Q96L92 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX27Q96L92 BNIP3P41-201ENST00000503774 571 ntBASIC4.54□□□□□ -1.68
SNX27Q96L92 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.54□□□□□ -1.68
SNX27Q96L92 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX27Q96L92 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX27Q96L92 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.54□□□□□ -1.68
SNX27Q96L92 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.54□□□□□ -1.68
SNX27Q96L92 AC091965.2-201ENST00000512324 613 ntBASIC4.54□□□□□ -1.68
SNX27Q96L92 AC005798.1-201ENST00000513715 387 ntBASIC4.54□□□□□ -1.68
SNX27Q96L92 AC026403.1-201ENST00000518938 295 ntBASIC4.54□□□□□ -1.68
SNX27Q96L92 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX27Q96L92 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.54□□□□□ -1.68
SNX27Q96L92 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SNX27Q96L92 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.54□□□□□ -1.68
SNX27Q96L92 AC007115.1-201ENST00000546853 234 ntBASIC4.54□□□□□ -1.68
SNX27Q96L92 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.54□□□□□ -1.68
SNX27Q96L92 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX27Q96L92 HSPE1P5-201ENST00000561489 272 ntBASIC4.54□□□□□ -1.68
SNX27Q96L92 MIR5685-201ENST00000579080 79 ntBASIC4.54□□□□□ -1.68
SNX27Q96L92 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SNX27Q96L92 AC008507.1-201ENST00000587506 734 ntBASIC4.54□□□□□ -1.68
SNX27Q96L92 AP003117.2-201ENST00000606010 545 ntBASIC4.54□□□□□ -1.68
SNX27Q96L92 AC090116.1-201ENST00000615679 446 ntBASIC4.54□□□□□ -1.68
SNX27Q96L92 MIR7151-201ENST00000617477 60 ntBASIC4.54□□□□□ -1.68
SNX27Q96L92 MIR6715B-201ENST00000637172 77 ntBASIC4.54□□□□□ -1.68
SNX27Q96L92 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SNX27Q96L92 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.54□□□□□ -1.68
SNX27Q96L92 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.54□□□□□ -1.68
SNX27Q96L92 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SNX27Q96L92 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SNX27Q96L92 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
SNX27Q96L92 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.54□□□□□ -1.68
SNX27Q96L92 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNX27Q96L92 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.54□□□□□ -1.68
SNX27Q96L92 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNX27Q96L92 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNX27Q96L92 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNX27Q96L92 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SNX27Q96L92 RNU4-21P-201ENST00000362802 126 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 RNU6-501P-201ENST00000364072 100 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 RNU6-289P-201ENST00000364093 107 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 RNU6-777P-201ENST00000364265 104 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 RNA5SP130-201ENST00000364431 114 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 MIR3074-201ENST00000384885 81 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 RNU11-4P-201ENST00000391149 133 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SNX27Q96L92 MIR320C1-201ENST00000408566 88 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.53□□□□□ -1.68
SNX27Q96L92 GLRXP1-201ENST00000423261 334 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 AC127537.2-201ENST00000439258 465 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 MTND5P14-201ENST00000441481 1267 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 HSPE1P28-201ENST00000443139 211 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX27Q96L92 AP000936.2-201ENST00000447151 681 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 AC005297.2-201ENST00000450430 606 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX27Q96L92 AC116337.2-201ENST00000477662 156 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 ACTR3P3-201ENST00000480448 893 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SNX27Q96L92 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX27Q96L92 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.53□□□□□ -1.68
SNX27Q96L92 HIGD1AP3-201ENST00000515857 278 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 Y_RNA.695-201ENST00000516715 107 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 RPL12P22-201ENST00000519073 490 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 AC060788.1-201ENST00000521318 469 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX27Q96L92 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX27Q96L92 AC100770.1-201ENST00000532310 322 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 AC069240.1-201ENST00000548774 375 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.53□□□□□ -1.68
SNX27Q96L92 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.53□□□□□ -1.68
SNX27Q96L92 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX27Q96L92 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.53□□□□□ -1.68
SNX27Q96L92 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SNX27Q96L92 RPL23AP92-201ENST00000603609 255 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms