Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CALR3Q96L12 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.04□□□□□ -1.44
CALR3Q96L12 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.04□□□□□ -1.44
CALR3Q96L12 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.03□□□□□ -1.44
CALR3Q96L12 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC6.03□□□□□ -1.44
CALR3Q96L12 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CALR3Q96L12 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CALR3Q96L12 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CALR3Q96L12 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CALR3Q96L12 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CALR3Q96L12 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CALR3Q96L12 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CALR3Q96L12 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CALR3Q96L12 RN7SKP184-201ENST00000362348 333 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 RNA5SP223-201ENST00000365174 120 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 RNU6-715P-201ENST00000365204 103 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CALR3Q96L12 SNORA70.6-201ENST00000383934 134 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 SNORA51.9-201ENST00000384295 124 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 SNORD3H-201ENST00000384486 214 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CALR3Q96L12 RNU6-882P-201ENST00000391025 103 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 AC005042.1-201ENST00000393397 800 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 AL080315.1-201ENST00000406055 466 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 RNU6-954P-201ENST00000411355 107 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC6.03□□□□□ -1.44
CALR3Q96L12 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.03□□□□□ -1.44
CALR3Q96L12 RPL12P49-201ENST00000441100 121 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 Z80107.2-201ENST00000445127 392 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.03□□□□□ -1.44
CALR3Q96L12 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC6.03□□□□□ -1.44
CALR3Q96L12 RN7SL568P-201ENST00000493069 298 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 AC025164.1-201ENST00000496249 478 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 RPS27AP13-201ENST00000498403 237 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.03□□□□□ -1.44
CALR3Q96L12 TBCAP3-201ENST00000512475 312 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.03□□□□□ -1.44
CALR3Q96L12 RNU2-69P-201ENST00000516061 100 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 SNORA14.1-201ENST00000516113 141 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 RNU6-840P-201ENST00000517275 65 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.03□□□□□ -1.44
CALR3Q96L12 MTCO3P23-201ENST00000561363 289 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 AC096996.1-201ENST00000563813 325 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC6.03□□□□□ -1.44
CALR3Q96L12 MIR4776-2-201ENST00000580204 80 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC6.03□□□□□ -1.44
CALR3Q96L12 AC092266.1-201ENST00000610958 165 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.03□□□□□ -1.44
CALR3Q96L12 uc_338.7-201ENST00000621834 124 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 MTND5P10-201ENST00000603719 1809 ntBASIC6.03□□□□□ -1.44
CALR3Q96L12 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CALR3Q96L12 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CALR3Q96L12 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.03□□□□□ -1.44
CALR3Q96L12 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CALR3Q96L12 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
CALR3Q96L12 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CALR3Q96L12 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CALR3Q96L12 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CALR3Q96L12 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.03□□□□□ -1.44
CALR3Q96L12 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.03□□□□□ -1.44
CALR3Q96L12 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.02□□□□□ -1.45
CALR3Q96L12 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CALR3Q96L12 AC022893.2-201ENST00000564832 3296 ntBASIC6.02□□□□□ -1.45
CALR3Q96L12 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CALR3Q96L12 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CALR3Q96L12 Y_RNA.145-201ENST00000363527 102 ntBASIC6.02□□□□□ -1.45
CALR3Q96L12 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CALR3Q96L12 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CALR3Q96L12 RNU6-601P-201ENST00000384540 107 ntBASIC6.02□□□□□ -1.45
CALR3Q96L12 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC6.02□□□□□ -1.45
CALR3Q96L12 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.02□□□□□ -1.45
CALR3Q96L12 MRPS31P2-201ENST00000451581 518 ntBASIC6.02□□□□□ -1.45
CALR3Q96L12 ELOCP24-201ENST00000456370 334 ntBASIC6.02□□□□□ -1.45
CALR3Q96L12 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC6.02□□□□□ -1.45
CALR3Q96L12 RNU6-953P-201ENST00000459154 107 ntBASIC6.02□□□□□ -1.45
CALR3Q96L12 AP000942.1-201ENST00000463969 747 ntBASIC6.02□□□□□ -1.45
CALR3Q96L12 AP000797.2-201ENST00000475768 606 ntBASIC6.02□□□□□ -1.45
CALR3Q96L12 AC012158.1-204ENST00000483430 465 ntBASIC6.02□□□□□ -1.45
CALR3Q96L12 MTCYBP40-201ENST00000509390 1135 ntBASIC6.02□□□□□ -1.45
CALR3Q96L12 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC6.02□□□□□ -1.45
CALR3Q96L12 RNA5SP441-201ENST00000516809 88 ntBASIC6.02□□□□□ -1.45
CALR3Q96L12 RN7SKP258-201ENST00000517151 304 ntBASIC6.02□□□□□ -1.45
CALR3Q96L12 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC6.02□□□□□ -1.45
CALR3Q96L12 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CALR3Q96L12 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.02□□□□□ -1.45
CALR3Q96L12 SNRPGP18-201ENST00000553000 214 ntBASIC6.02□□□□□ -1.45
CALR3Q96L12 AC133104.2-201ENST00000615272 193 ntBASIC6.02□□□□□ -1.45
CALR3Q96L12 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CALR3Q96L12 MTND5P42-201ENST00000637720 498 ntBASIC6.02□□□□□ -1.45
CALR3Q96L12 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.02□□□□□ -1.45
CALR3Q96L12 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
CALR3Q96L12 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CALR3Q96L12 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CALR3Q96L12 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.01□□□□□ -1.45
CALR3Q96L12 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CALR3Q96L12 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CALR3Q96L12 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CALR3Q96L12 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CALR3Q96L12 RNU6-14P-201ENST00000384630 106 ntBASIC6.01□□□□□ -1.45
CALR3Q96L12 AL139039.1-201ENST00000401900 692 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms