Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS50Q96JG6 AC005832.2-201ENST00000538921 1430 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS50Q96JG6 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS50Q96JG6 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 SNORD82-201ENST00000365530 70 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 RNU6-744P-201ENST00000365557 107 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 RNU6-1316P-201ENST00000384242 108 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS50Q96JG6 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 HMGB3P23-201ENST00000414981 585 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 AIMP1P1-201ENST00000418670 937 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 AC092832.1-201ENST00000422934 400 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 RPS12P10-201ENST00000427031 377 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 C8orf59P1-201ENST00000429930 303 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 AL590233.1-201ENST00000430017 456 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 AC127537.2-201ENST00000439258 465 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 PPIAP3-201ENST00000450588 505 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 AL033528.1-201ENST00000453780 140 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 Z82190.1-201ENST00000454534 490 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 SNRPGP5-201ENST00000456003 220 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS50Q96JG6 AC068587.1-201ENST00000483613 781 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 LARP1BP2-201ENST00000486594 519 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 AC013356.1-201ENST00000489027 564 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 RN7SL810P-201ENST00000493031 276 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 RNF138P1-201ENST00000502765 546 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 AC020593.1-201ENST00000507399 299 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 AC108043.1-201ENST00000512696 574 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 RN7SKP298-201ENST00000515950 94 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 AC022878.1-201ENST00000530684 149 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 AL360157.1-201ENST00000565962 87 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 AC009977.1-201ENST00000586015 570 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 BNIP3P8-201ENST00000597863 560 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 AP003465.2-201ENST00000602571 373 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 AC080013.4-201ENST00000607624 649 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 AC131902.3-201ENST00000611767 581 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 AC008250.2-201ENST00000615261 205 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 AL731566.2-201ENST00000618971 317 ntBASIC4.29□□□□□ -1.72
VPS50Q96JG6 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
VPS50Q96JG6 AL391684.1-202ENST00000641293 1636 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS50Q96JG6 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS50Q96JG6 AC011978.2-201ENST00000569835 2054 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VPS50Q96JG6 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
VPS50Q96JG6 CCT4P2-201ENST00000233836 1548 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 RNU1-63P-201ENST00000383902 164 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VPS50Q96JG6 AL138878.1-201ENST00000405131 347 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS50Q96JG6 MTCO1P17-201ENST00000411522 491 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS50Q96JG6 PSMA6P3-201ENST00000428242 164 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS50Q96JG6 RPS3AP54-201ENST00000435535 734 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS50Q96JG6 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS50Q96JG6 PGBD4P3-201ENST00000440731 581 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS50Q96JG6 BX276092.4-201ENST00000452056 248 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS50Q96JG6 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS50Q96JG6 ISCUP1-201ENST00000454451 448 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.28□□□□□ -1.72
VPS50Q96JG6 AC093899.1-201ENST00000457984 376 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS50Q96JG6 AC106872.2-201ENST00000494303 480 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS50Q96JG6 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS50Q96JG6 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.28□□□□□ -1.72
VPS50Q96JG6 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms