Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 HMGB1P25-201ENST00000468402 607 ntBASIC3.8□□□□□ -1.8
HDAC11Q96DB2 AC010285.1-201ENST00000470580 392 ntBASIC3.8□□□□□ -1.8
HDAC11Q96DB2 RPL31P13-201ENST00000484151 370 ntBASIC3.8□□□□□ -1.8
HDAC11Q96DB2 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.8□□□□□ -1.8
HDAC11Q96DB2 AC114981.1-201ENST00000503897 678 ntBASIC3.8□□□□□ -1.8
HDAC11Q96DB2 AC091951.3-201ENST00000504093 246 ntBASIC3.8□□□□□ -1.8
HDAC11Q96DB2 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.8□□□□□ -1.8
HDAC11Q96DB2 AC006390.1-201ENST00000508068 283 ntBASIC3.8□□□□□ -1.8
HDAC11Q96DB2 AC010625.1-201ENST00000511296 403 ntBASIC3.8□□□□□ -1.8
HDAC11Q96DB2 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.8□□□□□ -1.8
HDAC11Q96DB2 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.8□□□□□ -1.8
HDAC11Q96DB2 FABP5P12-201ENST00000515543 389 ntBASIC3.8□□□□□ -1.8
HDAC11Q96DB2 AC093853.1-201ENST00000515689 483 ntBASIC3.8□□□□□ -1.8
HDAC11Q96DB2 SNORA31.20-201ENST00000517111 133 ntBASIC3.8□□□□□ -1.8
HDAC11Q96DB2 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.8□□□□□ -1.8
HDAC11Q96DB2 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.8□□□□□ -1.8
HDAC11Q96DB2 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.8□□□□□ -1.8
HDAC11Q96DB2 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HDAC11Q96DB2 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HDAC11Q96DB2 AC126177.3-201ENST00000551839 688 ntBASIC3.8□□□□□ -1.8
HDAC11Q96DB2 AL121603.1-201ENST00000553815 142 ntBASIC3.8□□□□□ -1.8
HDAC11Q96DB2 NBEAP1-201ENST00000554452 979 ntBASIC3.8□□□□□ -1.8
HDAC11Q96DB2 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.8□□□□□ -1.8
HDAC11Q96DB2 RPL21P12-201ENST00000559810 515 ntBASIC3.8□□□□□ -1.8
HDAC11Q96DB2 HSPE1P5-201ENST00000561489 272 ntBASIC3.8□□□□□ -1.8
HDAC11Q96DB2 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HDAC11Q96DB2 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HDAC11Q96DB2 AC244205.2-202ENST00000635781 342 ntBASIC3.8□□□□□ -1.8
HDAC11Q96DB2 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HDAC11Q96DB2 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HDAC11Q96DB2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HDAC11Q96DB2 AC244517.1-201ENST00000606030 2086 ntBASIC3.8□□□□□ -1.8
HDAC11Q96DB2 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.8□□□□□ -1.8
HDAC11Q96DB2 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HDAC11Q96DB2 AP001148.1-201ENST00000624124 2359 ntBASIC3.8□□□□□ -1.8
HDAC11Q96DB2 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.79□□□□□ -1.8
HDAC11Q96DB2 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.79□□□□□ -1.8
HDAC11Q96DB2 OR5BR1P-201ENST00000524992 1330 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HDAC11Q96DB2 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
HDAC11Q96DB2 SNORA71.3-201ENST00000362582 128 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 MIR634-201ENST00000385208 97 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 DHFRP6-201ENST00000401776 268 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.79□□□□□ -1.8
HDAC11Q96DB2 RNU6-712P-201ENST00000410558 100 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 RAD23BP2-201ENST00000416003 1207 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AL139421.1-201ENST00000423010 169 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.79□□□□□ -1.8
HDAC11Q96DB2 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.79□□□□□ -1.8
HDAC11Q96DB2 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.79□□□□□ -1.8
HDAC11Q96DB2 RPL26P28-201ENST00000451325 435 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.79□□□□□ -1.8
HDAC11Q96DB2 RPL7P49-201ENST00000471402 708 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AC090453.1-201ENST00000495560 436 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 HMGB1P22-201ENST00000505315 124 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 RNU6-1073P-201ENST00000517182 106 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AC008489.1-201ENST00000524271 483 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AC109635.4-202ENST00000531666 412 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AC024224.1-201ENST00000538284 609 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AL121766.1-201ENST00000547436 487 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AC010198.2-201ENST00000550612 259 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AC009712.1-201ENST00000564938 316 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.79□□□□□ -1.8
HDAC11Q96DB2 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.79□□□□□ -1.8
HDAC11Q96DB2 MIR3186-201ENST00000577404 85 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 MIR5047-201ENST00000579212 100 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.79□□□□□ -1.8
HDAC11Q96DB2 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.79□□□□□ -1.8
HDAC11Q96DB2 KLKP1-201ENST00000595979 403 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AC011816.2-201ENST00000607089 556 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AC097478.2-201ENST00000610572 514 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AC025588.4-201ENST00000615802 908 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 U7.8-201ENST00000619968 63 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AC092628.2-201ENST00000622492 339 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AC006963.1-201ENST00000624003 1052 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 MIR4278-201ENST00000636094 69 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 U6.98-201ENST00000637157 84 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AP000553.6-201ENST00000641242 118 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HDAC11Q96DB2 AP001350.1-201ENST00000601906 1524 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 MTND5P24-201ENST00000438892 1767 ntBASIC3.79□□□□□ -1.8
HDAC11Q96DB2 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.78□□□□□ -1.8
HDAC11Q96DB2 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.78□□□□□ -1.8
HDAC11Q96DB2 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.78□□□□□ -1.8
HDAC11Q96DB2 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HDAC11Q96DB2 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.78□□□□□ -1.8
HDAC11Q96DB2 SNORA51.2-201ENST00000364595 132 ntBASIC3.78□□□□□ -1.8
HDAC11Q96DB2 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.78□□□□□ -1.8
HDAC11Q96DB2 RNU6-1181P-201ENST00000384191 106 ntBASIC3.78□□□□□ -1.8
HDAC11Q96DB2 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.78□□□□□ -1.8
HDAC11Q96DB2 MTHFD2P2-201ENST00000407725 247 ntBASIC3.78□□□□□ -1.8
HDAC11Q96DB2 RNU2-37P-201ENST00000410695 177 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms